Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.49□□□□□ -1.53
PDLIM1O00151 PFN1P6-201ENST00000476786 399 ntBASIC5.49□□□□□ -1.53
PDLIM1O00151 RPL21P6-201ENST00000479171 504 ntBASIC5.49□□□□□ -1.53
PDLIM1O00151 RPL34P33-201ENST00000486062 334 ntBASIC5.49□□□□□ -1.53
PDLIM1O00151 AC021006.1-201ENST00000489849 553 ntBASIC5.49□□□□□ -1.53
PDLIM1O00151 AC108103.1-201ENST00000511286 446 ntBASIC5.49□□□□□ -1.53
PDLIM1O00151 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.49□□□□□ -1.53
PDLIM1O00151 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.49□□□□□ -1.53
PDLIM1O00151 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.49□□□□□ -1.53
PDLIM1O00151 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.49□□□□□ -1.53
PDLIM1O00151 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.49□□□□□ -1.53
PDLIM1O00151 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.49□□□□□ -1.53
PDLIM1O00151 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM1O00151 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.49□□□□□ -1.53
PDLIM1O00151 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.49□□□□□ -1.53
PDLIM1O00151 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.49□□□□□ -1.53
PDLIM1O00151 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.49□□□□□ -1.53
PDLIM1O00151 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM1O00151 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM1O00151 Z95327.2-201ENST00000414579 1873 ntBASIC5.49□□□□□ -1.53
PDLIM1O00151 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.49□□□□□ -1.53
PDLIM1O00151 EIF3EP1-201ENST00000433978 1316 ntBASIC5.48□□□□□ -1.53
PDLIM1O00151 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.48□□□□□ -1.53
PDLIM1O00151 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
PDLIM1O00151 TET1P1-201ENST00000426627 2301 ntBASIC5.48□□□□□ -1.53
PDLIM1O00151 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM1O00151 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM1O00151 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.48□□□□□ -1.53
PDLIM1O00151 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
PDLIM1O00151 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.48□□□□□ -1.53
PDLIM1O00151 RNA5SP91-201ENST00000390902 119 ntBASIC5.48□□□□□ -1.53
PDLIM1O00151 RN7SKP247-201ENST00000411094 308 ntBASIC5.48□□□□□ -1.53
PDLIM1O00151 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM1O00151 AL358176.3-201ENST00000420757 454 ntBASIC5.48□□□□□ -1.53
PDLIM1O00151 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.48□□□□□ -1.53
PDLIM1O00151 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.48□□□□□ -1.53
PDLIM1O00151 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.48□□□□□ -1.53
PDLIM1O00151 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.48□□□□□ -1.53
PDLIM1O00151 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.48□□□□□ -1.53
PDLIM1O00151 OR52E7P-201ENST00000452394 933 ntBASIC5.48□□□□□ -1.53
PDLIM1O00151 AL645937.3-201ENST00000453647 936 ntBASIC5.48□□□□□ -1.53
PDLIM1O00151 AC022795.1-201ENST00000473808 480 ntBASIC5.48□□□□□ -1.53
PDLIM1O00151 RPL37P23-201ENST00000492641 294 ntBASIC5.48□□□□□ -1.53
PDLIM1O00151 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.48□□□□□ -1.53
PDLIM1O00151 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM1O00151 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.48□□□□□ -1.53
PDLIM1O00151 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.48□□□□□ -1.53
PDLIM1O00151 GAPDHP62-201ENST00000515313 990 ntBASIC5.48□□□□□ -1.53
PDLIM1O00151 RNA5SP434-201ENST00000516647 121 ntBASIC5.48□□□□□ -1.53
PDLIM1O00151 MIR2117-201ENST00000516780 80 ntBASIC5.48□□□□□ -1.53
PDLIM1O00151 HMGB1P19-201ENST00000517578 577 ntBASIC5.48□□□□□ -1.53
PDLIM1O00151 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM1O00151 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.48□□□□□ -1.53
PDLIM1O00151 AC084121.1-201ENST00000533882 835 ntBASIC5.48□□□□□ -1.53
PDLIM1O00151 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.48□□□□□ -1.53
PDLIM1O00151 AL845552.1-201ENST00000556820 323 ntBASIC5.48□□□□□ -1.53
PDLIM1O00151 AL163952.1-202ENST00000569625 600 ntBASIC5.48□□□□□ -1.53
PDLIM1O00151 MIR4271-201ENST00000582451 67 ntBASIC5.48□□□□□ -1.53
PDLIM1O00151 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.48□□□□□ -1.53
PDLIM1O00151 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.48□□□□□ -1.53
PDLIM1O00151 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.48□□□□□ -1.53
PDLIM1O00151 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.48□□□□□ -1.53
PDLIM1O00151 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.48□□□□□ -1.53
PDLIM1O00151 AC073389.3-201ENST00000609434 935 ntBASIC5.48□□□□□ -1.53
PDLIM1O00151 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.48□□□□□ -1.53
PDLIM1O00151 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM1O00151 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.48□□□□□ -1.53
PDLIM1O00151 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.48□□□□□ -1.53
PDLIM1O00151 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM1O00151 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
PDLIM1O00151 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PDLIM1O00151 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM1O00151 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM1O00151 AC018717.1-201ENST00000457712 1505 ntBASIC5.48□□□□□ -1.53
PDLIM1O00151 MFSD8-239ENST00000641590 2479 ntBASIC5.48□□□□□ -1.53
PDLIM1O00151 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM1O00151 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
PDLIM1O00151 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM1O00151 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.48□□□□□ -1.53
PDLIM1O00151 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDLIM1O00151 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDLIM1O00151 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDLIM1O00151 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
PDLIM1O00151 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
PDLIM1O00151 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDLIM1O00151 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDLIM1O00151 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDLIM1O00151 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDLIM1O00151 RNA5SP110-201ENST00000362638 115 ntBASIC5.47□□□□□ -1.53
PDLIM1O00151 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.47□□□□□ -1.53
PDLIM1O00151 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.47□□□□□ -1.53
PDLIM1O00151 AL096829.1-201ENST00000413677 457 ntBASIC5.47□□□□□ -1.53
PDLIM1O00151 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.47□□□□□ -1.53
PDLIM1O00151 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDLIM1O00151 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.47□□□□□ -1.53
PDLIM1O00151 AC096775.1-201ENST00000437724 448 ntBASIC5.47□□□□□ -1.53
PDLIM1O00151 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.47□□□□□ -1.53
PDLIM1O00151 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.47□□□□□ -1.53
PDLIM1O00151 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.47□□□□□ -1.53
PDLIM1O00151 RPS6P2-201ENST00000454208 705 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms