Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AL513327.3-201ENST00000602618 469 ntBASIC6.9□□□□□ -1.31
RGPD3A6NKT7 AP001885.1-201ENST00000621658 558 ntBASIC6.9□□□□□ -1.31
RGPD3A6NKT7 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RGPD3A6NKT7 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RGPD3A6NKT7 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.31
RGPD3A6NKT7 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 GLULP6-201ENST00000399502 913 ntBASIC6.89□□□□□ -1.31
RGPD3A6NKT7 OR2AM1P-201ENST00000422137 422 ntBASIC6.89□□□□□ -1.31
RGPD3A6NKT7 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 AC239367.2-201ENST00000447309 705 ntBASIC6.89□□□□□ -1.31
RGPD3A6NKT7 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 AP002981.1-201ENST00000517692 975 ntBASIC6.89□□□□□ -1.31
RGPD3A6NKT7 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 HIRAP1-201ENST00000605318 787 ntBASIC6.89□□□□□ -1.31
RGPD3A6NKT7 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RGPD3A6NKT7 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
RGPD3A6NKT7 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
RGPD3A6NKT7 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RGPD3A6NKT7 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RGPD3A6NKT7 MIR23A-201ENST00000385245 73 ntBASIC6.88□□□□□ -1.31
RGPD3A6NKT7 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
RGPD3A6NKT7 AP002530.1-201ENST00000405705 684 ntBASIC6.88□□□□□ -1.31
RGPD3A6NKT7 RNA5SP113-201ENST00000410486 84 ntBASIC6.88□□□□□ -1.31
RGPD3A6NKT7 AC069213.2-201ENST00000420238 366 ntBASIC6.88□□□□□ -1.31
RGPD3A6NKT7 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.88□□□□□ -1.31
RGPD3A6NKT7 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.88□□□□□ -1.31
RGPD3A6NKT7 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
RGPD3A6NKT7 RPS17P5-201ENST00000498293 408 ntBASIC6.88□□□□□ -1.31
RGPD3A6NKT7 AC023818.1-201ENST00000498379 384 ntBASIC6.88□□□□□ -1.31
RGPD3A6NKT7 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC6.88□□□□□ -1.31
RGPD3A6NKT7 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.88□□□□□ -1.31
RGPD3A6NKT7 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC6.88□□□□□ -1.31
RGPD3A6NKT7 AL078621.3-201ENST00000623707 2042 ntBASIC6.88□□□□□ -1.31
RGPD3A6NKT7 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RGPD3A6NKT7 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
RGPD3A6NKT7 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RGPD3A6NKT7 RN7SKP151-201ENST00000410230 316 ntBASIC6.87□□□□□ -1.31
RGPD3A6NKT7 AC004690.1-201ENST00000418216 328 ntBASIC6.87□□□□□ -1.31
RGPD3A6NKT7 RPL36AP15-201ENST00000444514 266 ntBASIC6.87□□□□□ -1.31
RGPD3A6NKT7 RPL10P17-201ENST00000453852 316 ntBASIC6.87□□□□□ -1.31
RGPD3A6NKT7 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.87□□□□□ -1.31
RGPD3A6NKT7 AC093824.1-201ENST00000508796 343 ntBASIC6.87□□□□□ -1.31
RGPD3A6NKT7 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.87□□□□□ -1.31
RGPD3A6NKT7 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.87□□□□□ -1.31
RGPD3A6NKT7 MIR1254-2-201ENST00000579553 63 ntBASIC6.87□□□□□ -1.31
RGPD3A6NKT7 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.87□□□□□ -1.31
RGPD3A6NKT7 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
RGPD3A6NKT7 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RGPD3A6NKT7 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
RGPD3A6NKT7 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RGPD3A6NKT7 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RGPD3A6NKT7 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RGPD3A6NKT7 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
RGPD3A6NKT7 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.87□□□□□ -1.31
RGPD3A6NKT7 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
RGPD3A6NKT7 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RGPD3A6NKT7 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.87□□□□□ -1.31
RGPD3A6NKT7 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.87□□□□□ -1.31
RGPD3A6NKT7 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
RGPD3A6NKT7 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RGPD3A6NKT7 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RGPD3A6NKT7 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC6.87□□□□□ -1.31
RGPD3A6NKT7 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
RGPD3A6NKT7 AL132640.2-201ENST00000559968 1698 ntBASIC6.87□□□□□ -1.31
RGPD3A6NKT7 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.87□□□□□ -1.31
RGPD3A6NKT7 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.87□□□□□ -1.31
RGPD3A6NKT7 RPS7P6-201ENST00000485777 579 ntBASIC6.87□□□□□ -1.31
RGPD3A6NKT7 TRBV5-2-201ENST00000489095 273 ntBASIC6.87□□□□□ -1.31
RGPD3A6NKT7 AC140172.1-201ENST00000502928 141 ntBASIC6.87□□□□□ -1.31
RGPD3A6NKT7 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.87□□□□□ -1.31
RGPD3A6NKT7 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.87□□□□□ -1.31
RGPD3A6NKT7 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.87□□□□□ -1.31
RGPD3A6NKT7 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms