Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 USP9YP1-201ENST00000513521 1002 ntBASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 OR5H7P-201ENST00000514084 930 ntBASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 RNA5SP438-201ENST00000516561 112 ntBASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 AC060775.1-201ENST00000518241 520 ntBASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 HMGN2P36-201ENST00000529541 409 ntBASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 AP000648.1-201ENST00000529682 397 ntBASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 AC068993.1-201ENST00000546724 589 ntBASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 LSM3P2-201ENST00000551246 273 ntBASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 COX6CP7-201ENST00000597056 208 ntBASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 AL031601.1-201ENST00000605702 394 ntBASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 MIR6071-201ENST00000616741 78 ntBASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DRB4X5D2U9 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 AC107977.1-201ENST00000355745 939 ntBASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 RNA5SP500-201ENST00000364486 119 ntBASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 RN7SKP29-201ENST00000410957 272 ntBASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 RNGTTP1-201ENST00000420965 728 ntBASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 AL035660.1-201ENST00000422041 222 ntBASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 NDUFS5P5-201ENST00000437256 321 ntBASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 ENPP7P11-201ENST00000505915 627 ntBASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 TMEM97P2-201ENST00000517841 403 ntBASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 AC126615.2-201ENST00000553003 515 ntBASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 AC099654.11-201ENST00000638857 294 ntBASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 MFSD8-219ENST00000641228 2559 ntBASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 AC011755.1-201ENST00000623763 2049 ntBASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 MFSD8-239ENST00000641590 2479 ntBASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
HLA-DRB4X5D2U9 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 RNU1-150P-201ENST00000362491 162 ntBASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 RNA5SP91-201ENST00000390902 119 ntBASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 EI24P3-201ENST00000399046 1062 ntBASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 MIR1203-201ENST00000408812 85 ntBASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 RPL24P2-201ENST00000421023 475 ntBASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 HSPE1P16-201ENST00000426640 348 ntBASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms