Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC084033.1-201ENST00000550830 633 ntBASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 MIR3614-201ENST00000581261 86 ntBASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 VN1R81P-201ENST00000602085 372 ntBASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 NF1P10-201ENST00000613227 742 ntBASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 AL158152.1-201ENST00000602652 1435 ntBASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 AC087516.1-201ENST00000561236 2428 ntBASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 RNA5SP284-201ENST00000384547 118 ntBASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 MIR130A-201ENST00000385274 89 ntBASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 AC117434.1-201ENST00000419971 836 ntBASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 AC242426.1-201ENST00000435270 960 ntBASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 AC073072.2-201ENST00000447425 348 ntBASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 RN7SL570P-201ENST00000484405 292 ntBASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 AC073610.1-201ENST00000489971 396 ntBASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 AC074255.1-201ENST00000511259 501 ntBASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 AC079600.1-201ENST00000550326 297 ntBASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 NANOGP3-201ENST00000605855 286 ntBASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 AC026124.2-201ENST00000621847 656 ntBASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 AC005261.6-201ENST00000623072 1387 ntBASIC5.42□□□□□ -1.54
ATG4BQ9Y4P1 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 AC007842.1-201ENST00000597336 2039 ntBASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 AC138907.8-201ENST00000623981 2256 ntBASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 RNA5SP435-201ENST00000364044 108 ntBASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 RN7SKP269-201ENST00000365545 319 ntBASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 RPL12P43-201ENST00000420608 499 ntBASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 MTND6P12-201ENST00000428247 522 ntBASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 MEMO1P4-201ENST00000453590 386 ntBASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 RPS23P2-201ENST00000463671 415 ntBASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 RPS7P6-201ENST00000485777 579 ntBASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 NENFP3-201ENST00000503735 313 ntBASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 MORF4L2P1-201ENST00000503761 858 ntBASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 AC091917.2-201ENST00000505002 744 ntBASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 AC021146.10-201ENST00000515628 706 ntBASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 SNORD116-30-201ENST00000516468 85 ntBASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 HMGN2P47-201ENST00000559378 272 ntBASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 177.2 ms