Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RHBDD3Q9Y3P4 SAMMSON-213ENST00000641336 1521 ntBASIC5.02□□□□□ -1.61
RHBDD3Q9Y3P4 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RHBDD3Q9Y3P4 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RHBDD3Q9Y3P4 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RHBDD3Q9Y3P4 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 RN7SKP145-201ENST00000363291 303 ntBASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 AC009506.2-201ENST00000420635 840 ntBASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 RPS27AP6-201ENST00000427962 448 ntBASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 RPL12P18-201ENST00000437175 325 ntBASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 CST12P-201ENST00000457644 362 ntBASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 AC107015.1-201ENST00000466902 747 ntBASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 AC099521.1-201ENST00000482557 334 ntBASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 GAPDHP62-201ENST00000515313 990 ntBASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 AC011853.1-201ENST00000518911 454 ntBASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 AC007956.1-201ENST00000555623 542 ntBASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 AC091078.2-201ENST00000557145 559 ntBASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 CYCSP38-201ENST00000559840 322 ntBASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 MIR6780B-201ENST00000610307 79 ntBASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 AC073592.6-201ENST00000624271 415 ntBASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 AL360270.2-201ENST00000562952 5985 ntBASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RHBDD3Q9Y3P4 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 AC027088.4-201ENST00000611559 1947 ntBASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 RNU6-1320P-201ENST00000390838 107 ntBASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 RNU6-1269P-201ENST00000391139 107 ntBASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 RPL11P3-201ENST00000395256 523 ntBASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 GNG5P5-201ENST00000420444 220 ntBASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 DEFA9P-201ENST00000433042 285 ntBASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 GAPDHP48-201ENST00000436626 961 ntBASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 RNU6-599P-201ENST00000459383 107 ntBASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 RNU6-1193P-201ENST00000459461 107 ntBASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 RN7SL193P-201ENST00000491708 276 ntBASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 RPS17P5-201ENST00000498293 408 ntBASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 AC021146.10-201ENST00000515628 706 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms