Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 CRIP3-201ENST00000274990 800 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 OR2S2-201ENST00000341959 1047 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 RNA5SP69-201ENST00000364477 117 ntBASIC9.76□□□□□ -0.85
RTN4Q9NQC3 AC106795.2-203ENST00000366189 511 ntTSL 5 BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 AIF1-203ENST00000376059 711 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 AC009967.1-201ENST00000379462 793 ntBASIC9.76□□□□□ -0.85
RTN4Q9NQC3 AL034417.1-201ENST00000399343 800 ntBASIC9.76□□□□□ -0.85
RTN4Q9NQC3 CCNYL3-201ENST00000407030 998 ntBASIC9.76□□□□□ -0.85
RTN4Q9NQC3 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 ATP5HP4-201ENST00000414313 475 ntBASIC9.76□□□□□ -0.85
RTN4Q9NQC3 ZNF70P1-201ENST00000417480 624 ntBASIC9.76□□□□□ -0.85
RTN4Q9NQC3 AC013429.2-201ENST00000418798 781 ntBASIC9.76□□□□□ -0.85
RTN4Q9NQC3 AL357632.1-201ENST00000426688 643 ntBASIC9.76□□□□□ -0.85
RTN4Q9NQC3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 AL136231.1-201ENST00000429407 730 ntBASIC9.76□□□□□ -0.85
RTN4Q9NQC3 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 AL022313.3-201ENST00000433970 405 ntTSL 2 BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 SDCBPP1-201ENST00000440192 890 ntBASIC9.76□□□□□ -0.85
RTN4Q9NQC3 AL133387.1-201ENST00000442188 382 ntTSL 3 BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 AC104164.1-201ENST00000460282 590 ntBASIC9.76□□□□□ -0.85
RTN4Q9NQC3 AC106820.1-201ENST00000468708 420 ntBASIC9.76□□□□□ -0.85
RTN4Q9NQC3 RPL5P12-201ENST00000477071 851 ntBASIC9.76□□□□□ -0.85
RTN4Q9NQC3 AC069439.1-201ENST00000494739 167 ntBASIC9.76□□□□□ -0.85
RTN4Q9NQC3 AP002026.1-205ENST00000509295 915 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 AC025465.4-201ENST00000513422 638 ntBASIC9.76□□□□□ -0.85
RTN4Q9NQC3 AL158819.1-201ENST00000514681 398 ntBASIC9.76□□□□□ -0.85
RTN4Q9NQC3 OR7E4P-201ENST00000530317 1013 ntBASIC9.76□□□□□ -0.85
RTN4Q9NQC3 AC006065.2-201ENST00000536978 211 ntBASIC9.76□□□□□ -0.85
RTN4Q9NQC3 LINC02304-201ENST00000554445 445 ntTSL 3 BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 AC010615.2-204ENST00000600469 830 ntTSL 3 BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 AL162413.1-201ENST00000603198 110 ntBASIC9.76□□□□□ -0.85
RTN4Q9NQC3 MIR6083-201ENST00000612737 106 ntBASIC9.76□□□□□ -0.85
RTN4Q9NQC3 AC012593.1-216ENST00000626183 444 ntTSL 5 BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 UGT2B4-206ENST00000512583 1836 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 SAGE4P-201ENST00000442271 3381 ntBASIC9.76□□□□□ -0.85
RTN4Q9NQC3 KRTAP9-6-201ENST00000391355 1303 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 SRSF5-217ENST00000557154 1500 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 FGL1-202ENST00000381841 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 HNRNPA1P54-201ENST00000411857 9714 ntBASIC9.75□□□□□ -0.85
RTN4Q9NQC3 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 USP17L21-202ENST00000621388 1677 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 REN-202ENST00000638118 1488 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 ATP5J2-202ENST00000359832 323 ntTSL 2 BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 RNU6-181P-201ENST00000363225 107 ntBASIC9.75□□□□□ -0.85
RTN4Q9NQC3 RNU6-1090P-201ENST00000364065 94 ntBASIC9.75□□□□□ -0.85
RTN4Q9NQC3 RNU6-1322P-201ENST00000364309 107 ntBASIC9.75□□□□□ -0.85
RTN4Q9NQC3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 AL356421.1-201ENST00000403255 413 ntBASIC9.75□□□□□ -0.85
RTN4Q9NQC3 AC012065.2-201ENST00000421295 375 ntBASIC9.75□□□□□ -0.85
RTN4Q9NQC3 PMP22-204ENST00000426385 571 ntTSL 2 BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 SDHAP1-203ENST00000427149 706 ntTSL 5 BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 ISX-AS1-201ENST00000427881 202 ntTSL 3 BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 OR51AB1P-201ENST00000429046 620 ntBASIC9.75□□□□□ -0.85
RTN4Q9NQC3 VDAC2P3-201ENST00000430995 828 ntBASIC9.75□□□□□ -0.85
RTN4Q9NQC3 PSMD10P2-201ENST00000432890 672 ntBASIC9.75□□□□□ -0.85
RTN4Q9NQC3 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 HMGB3P12-201ENST00000438745 556 ntBASIC9.75□□□□□ -0.85
RTN4Q9NQC3 AKR1C3-202ENST00000439082 972 ntAPPRIS ALT1 TSL 5 BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 AL592114.2-201ENST00000440142 532 ntBASIC9.75□□□□□ -0.85
RTN4Q9NQC3 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 CYP4F25P-201ENST00000446871 520 ntBASIC9.75□□□□□ -0.85
RTN4Q9NQC3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 PRDX2P1-201ENST00000450181 589 ntBASIC9.75□□□□□ -0.85
RTN4Q9NQC3 AC084017.1-201ENST00000483240 860 ntBASIC9.75□□□□□ -0.85
RTN4Q9NQC3 RPS4XP14-201ENST00000493072 781 ntBASIC9.75□□□□□ -0.85
RTN4Q9NQC3 AC084398.1-201ENST00000494902 459 ntBASIC9.75□□□□□ -0.85
RTN4Q9NQC3 GNGT2-203ENST00000507680 585 ntAPPRIS P1 TSL 4 BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 GNGT2-206ENST00000515635 783 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 ST13P6-201ENST00000522430 1102 ntBASIC9.75□□□□□ -0.85
RTN4Q9NQC3 FGF12-AS1-202ENST00000530635 555 ntTSL 4 BASIC9.75□□□□□ -0.85
RTN4Q9NQC3 OR7E11P-201ENST00000532901 952 ntBASIC9.75□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms