Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 AC016839.1-201ENST00000578162 867 ntBASIC5.91□□□□□ -1.46
PCDH9Q9HC56 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 AC091948.2-201ENST00000636510 279 ntBASIC5.91□□□□□ -1.46
PCDH9Q9HC56 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 BCORP1-203ENST00000513194 5093 ntBASIC5.91□□□□□ -1.46
PCDH9Q9HC56 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 NLRP3P1-201ENST00000622303 1785 ntBASIC5.9□□□□□ -1.46
PCDH9Q9HC56 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 RAB5CP1-201ENST00000395972 580 ntBASIC5.9□□□□□ -1.46
PCDH9Q9HC56 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 DHFRP5-201ENST00000406944 564 ntBASIC5.9□□□□□ -1.46
PCDH9Q9HC56 MIR1203-201ENST00000408812 85 ntBASIC5.9□□□□□ -1.46
PCDH9Q9HC56 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 MTATP6P11-201ENST00000428071 670 ntBASIC5.9□□□□□ -1.46
PCDH9Q9HC56 AC126120.1-201ENST00000431082 470 ntBASIC5.9□□□□□ -1.46
PCDH9Q9HC56 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 PCBP2P1-201ENST00000437262 977 ntBASIC5.9□□□□□ -1.46
PCDH9Q9HC56 AL138899.2-201ENST00000439139 499 ntBASIC5.9□□□□□ -1.46
PCDH9Q9HC56 EIF5AP4-201ENST00000441206 465 ntBASIC5.9□□□□□ -1.46
PCDH9Q9HC56 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 HLA-DPA3-207ENST00000454398 229 ntBASIC5.9□□□□□ -1.46
PCDH9Q9HC56 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 AC093166.4-201ENST00000457867 318 ntBASIC5.9□□□□□ -1.46
PCDH9Q9HC56 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 COL6A4P2-205ENST00000509855 506 ntBASIC5.9□□□□□ -1.46
PCDH9Q9HC56 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.9□□□□□ -1.46
PCDH9Q9HC56 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 AC005726.4-201ENST00000582858 458 ntBASIC5.9□□□□□ -1.46
PCDH9Q9HC56 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 FAM27E4-201ENST00000605259 342 ntBASIC5.9□□□□□ -1.46
PCDH9Q9HC56 AC092944.2-201ENST00000605443 889 ntBASIC5.9□□□□□ -1.46
PCDH9Q9HC56 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 AC108865.2-201ENST00000606881 432 ntBASIC5.9□□□□□ -1.46
PCDH9Q9HC56 AP005131.7-201ENST00000610087 611 ntBASIC5.9□□□□□ -1.46
PCDH9Q9HC56 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.9□□□□□ -1.46
PCDH9Q9HC56 AC073592.7-201ENST00000623659 507 ntBASIC5.9□□□□□ -1.46
PCDH9Q9HC56 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDH9Q9HC56 AC132825.8-201ENST00000640783 297 ntBASIC5.9□□□□□ -1.46
PCDH9Q9HC56 AL139254.3-201ENST00000641097 674 ntBASIC5.9□□□□□ -1.46
PCDH9Q9HC56 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
PCDH9Q9HC56 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
PCDH9Q9HC56 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PCDH9Q9HC56 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.9□□□□□ -1.47
PCDH9Q9HC56 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PCDH9Q9HC56 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PCDH9Q9HC56 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.9□□□□□ -1.47
PCDH9Q9HC56 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.9□□□□□ -1.47
PCDH9Q9HC56 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 HSPD1P7-201ENST00000447985 1686 ntBASIC5.89□□□□□ -1.47
PCDH9Q9HC56 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 OR4G1P-202ENST00000641173 1788 ntBASIC5.89□□□□□ -1.47
PCDH9Q9HC56 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 RNU1-150P-201ENST00000362491 162 ntBASIC5.89□□□□□ -1.47
PCDH9Q9HC56 RN7SKP145-201ENST00000363291 303 ntBASIC5.89□□□□□ -1.47
PCDH9Q9HC56 RNA5SP500-201ENST00000364486 119 ntBASIC5.89□□□□□ -1.47
PCDH9Q9HC56 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 RN7SKP29-201ENST00000410957 272 ntBASIC5.89□□□□□ -1.47
PCDH9Q9HC56 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.89□□□□□ -1.47
PCDH9Q9HC56 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 AL035660.1-201ENST00000422041 222 ntBASIC5.89□□□□□ -1.47
PCDH9Q9HC56 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 RPS27AP6-201ENST00000427962 448 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms