Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.76□□□□□ -1.33
UPF2Q9HAU5 AP000550.3-201ENST00000637734 379 ntBASIC6.76□□□□□ -1.33
UPF2Q9HAU5 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
UPF2Q9HAU5 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.76□□□□□ -1.33
UPF2Q9HAU5 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
UPF2Q9HAU5 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
UPF2Q9HAU5 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
UPF2Q9HAU5 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
UPF2Q9HAU5 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC6.76□□□□□ -1.33
UPF2Q9HAU5 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.75□□□□□ -1.33
UPF2Q9HAU5 AC083843.2-201ENST00000568248 6253 ntBASIC6.75□□□□□ -1.33
UPF2Q9HAU5 SMG1P4-204ENST00000523028 4131 ntBASIC6.75□□□□□ -1.33
UPF2Q9HAU5 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
UPF2Q9HAU5 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
UPF2Q9HAU5 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC6.75□□□□□ -1.33
UPF2Q9HAU5 CASC19-238ENST00000641523 1558 ntBASIC6.75□□□□□ -1.33
UPF2Q9HAU5 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.75□□□□□ -1.33
UPF2Q9HAU5 AL034549.2-201ENST00000618285 3373 ntBASIC6.75□□□□□ -1.33
UPF2Q9HAU5 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
UPF2Q9HAU5 RNA5SP30-201ENST00000365552 115 ntBASIC6.75□□□□□ -1.33
UPF2Q9HAU5 OR1L6-202ENST00000373684 1044 ntBASIC6.75□□□□□ -1.33
UPF2Q9HAU5 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
UPF2Q9HAU5 AL035696.2-201ENST00000407941 709 ntBASIC6.75□□□□□ -1.33
UPF2Q9HAU5 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
UPF2Q9HAU5 AK4P4-201ENST00000419465 646 ntBASIC6.75□□□□□ -1.33
UPF2Q9HAU5 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
UPF2Q9HAU5 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
UPF2Q9HAU5 RPL5P7-201ENST00000444235 813 ntBASIC6.75□□□□□ -1.33
UPF2Q9HAU5 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.75□□□□□ -1.33
UPF2Q9HAU5 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.75□□□□□ -1.33
UPF2Q9HAU5 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.75□□□□□ -1.33
UPF2Q9HAU5 RN7SKP238-201ENST00000516483 249 ntBASIC6.75□□□□□ -1.33
UPF2Q9HAU5 AP001284.1-201ENST00000528393 2118 ntBASIC6.75□□□□□ -1.33
UPF2Q9HAU5 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.75□□□□□ -1.33
UPF2Q9HAU5 AL356801.1-201ENST00000559320 294 ntBASIC6.75□□□□□ -1.33
UPF2Q9HAU5 MIR744-201ENST00000578242 98 ntBASIC6.75□□□□□ -1.33
UPF2Q9HAU5 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
UPF2Q9HAU5 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
UPF2Q9HAU5 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
UPF2Q9HAU5 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.75□□□□□ -1.33
UPF2Q9HAU5 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
UPF2Q9HAU5 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.75□□□□□ -1.33
UPF2Q9HAU5 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
UPF2Q9HAU5 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.75□□□□□ -1.33
UPF2Q9HAU5 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
UPF2Q9HAU5 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
UPF2Q9HAU5 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
UPF2Q9HAU5 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
UPF2Q9HAU5 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 TCP11X1-202ENST00000622971 1372 ntBASIC6.74□□□□□ -1.33
UPF2Q9HAU5 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 MIR130B-202ENST00000385018 82 ntBASIC6.74□□□□□ -1.33
UPF2Q9HAU5 PCNPP4-201ENST00000414817 517 ntBASIC6.74□□□□□ -1.33
UPF2Q9HAU5 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 RPSAP32-201ENST00000432681 526 ntBASIC6.74□□□□□ -1.33
UPF2Q9HAU5 RPL12P49-201ENST00000441100 121 ntBASIC6.74□□□□□ -1.33
UPF2Q9HAU5 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 CEACAMP11-201ENST00000455211 583 ntBASIC6.74□□□□□ -1.33
UPF2Q9HAU5 AC009120.1-201ENST00000493458 473 ntBASIC6.74□□□□□ -1.33
UPF2Q9HAU5 EIF3LP3-201ENST00000495197 822 ntBASIC6.74□□□□□ -1.33
UPF2Q9HAU5 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 MORF4L2P1-201ENST00000503761 858 ntBASIC6.74□□□□□ -1.33
UPF2Q9HAU5 ENPP7P11-201ENST00000505915 627 ntBASIC6.74□□□□□ -1.33
UPF2Q9HAU5 NACAP5-201ENST00000509863 636 ntBASIC6.74□□□□□ -1.33
UPF2Q9HAU5 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 AC009237.13-201ENST00000603193 276 ntBASIC6.74□□□□□ -1.33
UPF2Q9HAU5 AC108738.1-201ENST00000603703 237 ntBASIC6.74□□□□□ -1.33
UPF2Q9HAU5 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 AC092266.1-201ENST00000610958 165 ntBASIC6.74□□□□□ -1.33
UPF2Q9HAU5 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.74□□□□□ -1.33
UPF2Q9HAU5 MIR6823-201ENST00000622118 61 ntBASIC6.74□□□□□ -1.33
UPF2Q9HAU5 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
UPF2Q9HAU5 AF287957.1-201ENST00000607368 1595 ntBASIC6.74□□□□□ -1.33
UPF2Q9HAU5 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
UPF2Q9HAU5 Z83820.1-201ENST00000456978 1499 ntBASIC6.73□□□□□ -1.33
UPF2Q9HAU5 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
UPF2Q9HAU5 AL354854.1-201ENST00000455940 1363 ntBASIC6.73□□□□□ -1.33
UPF2Q9HAU5 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms