Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.74□□□□□ -1.33
UPF3BQ9BZI7 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.74□□□□□ -1.33
UPF3BQ9BZI7 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.74□□□□□ -1.33
UPF3BQ9BZI7 AC004477.3-201ENST00000614061 590 ntBASIC6.74□□□□□ -1.33
UPF3BQ9BZI7 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
UPF3BQ9BZI7 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
UPF3BQ9BZI7 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.74□□□□□ -1.33
UPF3BQ9BZI7 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.74□□□□□ -1.33
UPF3BQ9BZI7 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
UPF3BQ9BZI7 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
UPF3BQ9BZI7 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
UPF3BQ9BZI7 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.74□□□□□ -1.33
UPF3BQ9BZI7 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.74□□□□□ -1.33
UPF3BQ9BZI7 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.74□□□□□ -1.33
UPF3BQ9BZI7 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 AL137141.1-201ENST00000624622 4836 ntBASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 AL121886.1-201ENST00000358609 435 ntBASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 RPS6P23-201ENST00000413224 722 ntBASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 AL627308.1-201ENST00000435693 821 ntBASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 MTND2P40-201ENST00000436718 841 ntBASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 AC009963.4-201ENST00000448535 339 ntBASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 RPS27AP2-201ENST00000457576 465 ntBASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 AC011476.1-201ENST00000466725 307 ntBASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 RPS26P39-201ENST00000469206 341 ntBASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 AC004948.1-201ENST00000609858 672 ntBASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 AC016769.4-201ENST00000616893 535 ntBASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 MIR6719-201ENST00000622428 87 ntBASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 AC005618.4-201ENST00000625053 554 ntBASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 AC092451.3-201ENST00000625067 1343 ntBASIC6.73□□□□□ -1.33
UPF3BQ9BZI7 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 NENFP1-201ENST00000419476 466 ntBASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 AL590399.4-201ENST00000436561 601 ntBASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 MED28P3-201ENST00000444288 531 ntBASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 RN7SL570P-201ENST00000484405 292 ntBASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 DUTP7-201ENST00000507982 486 ntBASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 AC074255.1-201ENST00000511259 501 ntBASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 RN7SKP253-201ENST00000516424 309 ntBASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 AC112191.2-201ENST00000522428 333 ntBASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 AC135626.1-201ENST00000556983 435 ntBASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 MIR4489-201ENST00000578869 62 ntBASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 SNORD95-201ENST00000579879 68 ntBASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 AC144833.1-201ENST00000567953 4089 ntBASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.72□□□□□ -1.33
UPF3BQ9BZI7 MRE11P1-201ENST00000464884 2127 ntBASIC6.71□□□□□ -1.33
UPF3BQ9BZI7 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
UPF3BQ9BZI7 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
UPF3BQ9BZI7 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
UPF3BQ9BZI7 AL121839.2-201ENST00000565058 6943 ntBASIC6.71□□□□□ -1.33
UPF3BQ9BZI7 AC015689.2-201ENST00000528172 1738 ntBASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 Z95114.1-201ENST00000624264 14574 ntBASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 OR52B3P-201ENST00000314715 928 ntBASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms