Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
SCAPERQ9BY12 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC8.35□□□□□ -1.07
SCAPERQ9BY12 NPM1P36-201ENST00000415681 835 ntBASIC8.35□□□□□ -1.07
SCAPERQ9BY12 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC8.35□□□□□ -1.07
SCAPERQ9BY12 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC8.35□□□□□ -1.07
SCAPERQ9BY12 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC8.35□□□□□ -1.07
SCAPERQ9BY12 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC8.35□□□□□ -1.07
SCAPERQ9BY12 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC8.35□□□□□ -1.07
SCAPERQ9BY12 BNIP3P1-201ENST00000547295 580 ntBASIC8.35□□□□□ -1.07
SCAPERQ9BY12 AC011447.4-201ENST00000587562 111 ntBASIC8.35□□□□□ -1.07
SCAPERQ9BY12 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC8.35□□□□□ -1.07
SCAPERQ9BY12 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SCAPERQ9BY12 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SCAPERQ9BY12 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC8.35□□□□□ -1.07
SCAPERQ9BY12 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
SCAPERQ9BY12 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SCAPERQ9BY12 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC8.34□□□□□ -1.07
SCAPERQ9BY12 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SCAPERQ9BY12 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SCAPERQ9BY12 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC8.34□□□□□ -1.07
SCAPERQ9BY12 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC8.34□□□□□ -1.07
SCAPERQ9BY12 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC8.34□□□□□ -1.07
SCAPERQ9BY12 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SCAPERQ9BY12 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
SCAPERQ9BY12 RNA5SP123-201ENST00000363244 119 ntBASIC8.34□□□□□ -1.07
SCAPERQ9BY12 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC8.34□□□□□ -1.07
SCAPERQ9BY12 SNORA70H-201ENST00000383910 135 ntBASIC8.34□□□□□ -1.07
SCAPERQ9BY12 SNORA70J-201ENST00000384182 135 ntBASIC8.34□□□□□ -1.07
SCAPERQ9BY12 AC007161.1-204ENST00000423039 460 ntBASIC8.34□□□□□ -1.07
SCAPERQ9BY12 AC245028.1-201ENST00000423259 256 ntBASIC8.34□□□□□ -1.07
SCAPERQ9BY12 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC8.34□□□□□ -1.07
SCAPERQ9BY12 VDAC1P6-201ENST00000430062 855 ntBASIC8.34□□□□□ -1.07
SCAPERQ9BY12 AC091390.1-201ENST00000433904 331 ntBASIC8.34□□□□□ -1.07
SCAPERQ9BY12 RPS3AP38-201ENST00000435889 763 ntBASIC8.34□□□□□ -1.07
SCAPERQ9BY12 TPT1P13-201ENST00000449760 499 ntBASIC8.34□□□□□ -1.07
SCAPERQ9BY12 RPL17P2-201ENST00000491913 451 ntBASIC8.34□□□□□ -1.07
SCAPERQ9BY12 DPPA3P2-201ENST00000553589 478 ntBASIC8.34□□□□□ -1.07
SCAPERQ9BY12 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC8.34□□□□□ -1.07
SCAPERQ9BY12 TEX41-254ENST00000626394 423 ntTSL 5 BASIC8.34□□□□□ -1.07
SCAPERQ9BY12 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
SCAPERQ9BY12 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SCAPERQ9BY12 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC8.34□□□□□ -1.07
SCAPERQ9BY12 AC005224.3-201ENST00000584683 2140 ntBASIC8.34□□□□□ -1.07
SCAPERQ9BY12 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
SCAPERQ9BY12 MFSD8-216ENST00000641147 4009 ntBASIC8.34□□□□□ -1.08
SCAPERQ9BY12 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC8.34□□□□□ -1.08
SCAPERQ9BY12 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC8.34□□□□□ -1.08
SCAPERQ9BY12 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SCAPERQ9BY12 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SCAPERQ9BY12 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
SCAPERQ9BY12 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
SCAPERQ9BY12 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC8.33□□□□□ -1.08
SCAPERQ9BY12 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SCAPERQ9BY12 AP004289.1-201ENST00000436307 2205 ntBASIC8.33□□□□□ -1.08
SCAPERQ9BY12 INTS6P1-201ENST00000504674 2530 ntBASIC8.33□□□□□ -1.08
SCAPERQ9BY12 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC8.33□□□□□ -1.08
SCAPERQ9BY12 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
SCAPERQ9BY12 DNAJA1P4-201ENST00000406473 1166 ntBASIC8.33□□□□□ -1.08
SCAPERQ9BY12 RN7SKP126-201ENST00000411143 300 ntBASIC8.33□□□□□ -1.08
SCAPERQ9BY12 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC8.33□□□□□ -1.08
SCAPERQ9BY12 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC8.33□□□□□ -1.08
SCAPERQ9BY12 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC8.33□□□□□ -1.08
SCAPERQ9BY12 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC8.33□□□□□ -1.08
SCAPERQ9BY12 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC8.33□□□□□ -1.08
SCAPERQ9BY12 HMGB1P44-201ENST00000508597 572 ntBASIC8.33□□□□□ -1.08
SCAPERQ9BY12 AC004980.4-201ENST00000513375 203 ntBASIC8.33□□□□□ -1.08
SCAPERQ9BY12 AC024940.3-201ENST00000538551 316 ntBASIC8.33□□□□□ -1.08
SCAPERQ9BY12 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC8.33□□□□□ -1.08
SCAPERQ9BY12 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC8.33□□□□□ -1.08
SCAPERQ9BY12 AC087283.1-201ENST00000604029 1074 ntBASIC8.33□□□□□ -1.08
SCAPERQ9BY12 AC114876.1-201ENST00000490962 1366 ntBASIC8.33□□□□□ -1.08
SCAPERQ9BY12 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SCAPERQ9BY12 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SCAPERQ9BY12 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SCAPERQ9BY12 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SCAPERQ9BY12 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SCAPERQ9BY12 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC8.33□□□□□ -1.08
SCAPERQ9BY12 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SCAPERQ9BY12 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
SCAPERQ9BY12 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC8.33□□□□□ -1.08
SCAPERQ9BY12 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SCAPERQ9BY12 DPY19L1P1-201ENST00000417811 2594 ntBASIC8.32□□□□□ -1.08
SCAPERQ9BY12 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
SCAPERQ9BY12 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SCAPERQ9BY12 AC010329.1-201ENST00000593903 8328 ntBASIC8.32□□□□□ -1.08
SCAPERQ9BY12 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
SCAPERQ9BY12 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SCAPERQ9BY12 CDC123-202ENST00000378900 933 ntTSL 5 BASIC8.32□□□□□ -1.08
SCAPERQ9BY12 CHMP1B2P-201ENST00000399581 597 ntBASIC8.32□□□□□ -1.08
SCAPERQ9BY12 AC011753.3-201ENST00000443436 406 ntBASIC8.32□□□□□ -1.08
SCAPERQ9BY12 RPL31P44-201ENST00000447680 377 ntBASIC8.32□□□□□ -1.08
SCAPERQ9BY12 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
SCAPERQ9BY12 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC8.32□□□□□ -1.08
SCAPERQ9BY12 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SCAPERQ9BY12 AC010435.1-201ENST00000623353 1177 ntBASIC8.32□□□□□ -1.08
SCAPERQ9BY12 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC8.32□□□□□ -1.08
SCAPERQ9BY12 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC8.32□□□□□ -1.08
SCAPERQ9BY12 CR1-204ENST00000367052 7469 ntTSL 5 BASIC8.32□□□□□ -1.08
SCAPERQ9BY12 CR1-205ENST00000367053 7469 ntTSL 5 BASIC8.32□□□□□ -1.08
SCAPERQ9BY12 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms