Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 RNA5SP30-201ENST00000365552 115 ntBASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 MIR1286-201ENST00000408112 78 ntBASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 RNU4-34P-201ENST00000410431 124 ntBASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 NENFP1-201ENST00000419476 466 ntBASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 AC073072.2-201ENST00000447425 348 ntBASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 RPL32P33-201ENST00000487023 394 ntBASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 EIF1P7-201ENST00000487533 337 ntBASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 RN7SL547P-201ENST00000490793 290 ntBASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 AP006245.2-201ENST00000522004 300 ntBASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 AC063977.5-201ENST00000601044 974 ntBASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 AC016769.4-201ENST00000616893 535 ntBASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 AC109780.1-201ENST00000451768 1344 ntBASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 AC092451.3-201ENST00000625067 1343 ntBASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 CASC19-248ENST00000641674 1356 ntBASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 GAPDHP24-201ENST00000328713 983 ntBASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 RNA5SP453-201ENST00000362503 119 ntBASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 RPL11P3-201ENST00000395256 523 ntBASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 METTL15P3-201ENST00000415522 1221 ntBASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 MED28P3-201ENST00000444288 531 ntBASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 RPL35AP19-201ENST00000469425 329 ntBASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 AC139697.1-201ENST00000548429 745 ntBASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 DPPA3P2-202ENST00000557188 1219 ntBASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 AC015712.7-201ENST00000615211 635 ntBASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 CASC19-264ENST00000641912 1184 ntBASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 AC083899.1-201ENST00000454465 3819 ntBASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 MRE11P1-201ENST00000464884 2127 ntBASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 AL592429.1-201ENST00000403909 1473 ntBASIC6.85□□□□□ -1.31
RPAP1Q9BWH6 AC114786.1-201ENST00000512892 1415 ntBASIC6.84□□□□□ -1.31
RPAP1Q9BWH6 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.84□□□□□ -1.31
RPAP1Q9BWH6 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.84□□□□□ -1.31
RPAP1Q9BWH6 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.84□□□□□ -1.31
RPAP1Q9BWH6 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RPAP1Q9BWH6 SNORA74A-201ENST00000364089 198 ntBASIC6.84□□□□□ -1.31
RPAP1Q9BWH6 GAPDHP42-201ENST00000406848 981 ntBASIC6.84□□□□□ -1.31
RPAP1Q9BWH6 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.84□□□□□ -1.31
RPAP1Q9BWH6 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.84□□□□□ -1.31
RPAP1Q9BWH6 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.84□□□□□ -1.31
RPAP1Q9BWH6 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RPAP1Q9BWH6 RPS23P2-201ENST00000463671 415 ntBASIC6.84□□□□□ -1.31
RPAP1Q9BWH6 RN7SL610P-201ENST00000463845 291 ntBASIC6.84□□□□□ -1.31
RPAP1Q9BWH6 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.84□□□□□ -1.31
RPAP1Q9BWH6 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.84□□□□□ -1.31
RPAP1Q9BWH6 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.84□□□□□ -1.31
RPAP1Q9BWH6 AC015720.2-201ENST00000567709 334 ntBASIC6.84□□□□□ -1.31
RPAP1Q9BWH6 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.84□□□□□ -1.31
RPAP1Q9BWH6 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.84□□□□□ -1.31
RPAP1Q9BWH6 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.84□□□□□ -1.31
RPAP1Q9BWH6 AL390318.1-201ENST00000624564 687 ntBASIC6.84□□□□□ -1.31
RPAP1Q9BWH6 AC063952.1-203ENST00000634410 658 ntBASIC6.84□□□□□ -1.31
RPAP1Q9BWH6 SAMMSON-227ENST00000642114 1199 ntBASIC6.84□□□□□ -1.31
RPAP1Q9BWH6 GTF2IP4-201ENST00000453092 2054 ntBASIC6.84□□□□□ -1.31
RPAP1Q9BWH6 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC6.84□□□□□ -1.31
RPAP1Q9BWH6 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RPAP1Q9BWH6 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms