Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.7□□□□□ -1.5
PKP4Q99569 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.7□□□□□ -1.5
PKP4Q99569 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.7□□□□□ -1.5
PKP4Q99569 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.7□□□□□ -1.5
PKP4Q99569 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.7□□□□□ -1.5
PKP4Q99569 AC245128.3-201ENST00000594721 748 ntBASIC5.7□□□□□ -1.5
PKP4Q99569 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.7□□□□□ -1.5
PKP4Q99569 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.7□□□□□ -1.5
PKP4Q99569 AC092474.3-201ENST00000603022 568 ntBASIC5.7□□□□□ -1.5
PKP4Q99569 BX322635.1-201ENST00000605804 496 ntBASIC5.7□□□□□ -1.5
PKP4Q99569 AL356608.1-201ENST00000610034 820 ntBASIC5.7□□□□□ -1.5
PKP4Q99569 AL159169.2-201ENST00000610061 1269 ntBASIC5.7□□□□□ -1.5
PKP4Q99569 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.7□□□□□ -1.5
PKP4Q99569 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.7□□□□□ -1.5
PKP4Q99569 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
PKP4Q99569 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PKP4Q99569 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PKP4Q99569 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.7□□□□□ -1.5
PKP4Q99569 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PKP4Q99569 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PKP4Q99569 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.7□□□□□ -1.5
PKP4Q99569 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
PKP4Q99569 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PKP4Q99569 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
PKP4Q99569 HSPD1P7-201ENST00000447985 1686 ntBASIC5.69□□□□□ -1.5
PKP4Q99569 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.69□□□□□ -1.5
PKP4Q99569 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PKP4Q99569 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
PKP4Q99569 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.69□□□□□ -1.5
PKP4Q99569 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PKP4Q99569 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PKP4Q99569 AC020656.2-201ENST00000613291 5309 ntBASIC5.69□□□□□ -1.5
PKP4Q99569 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PKP4Q99569 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
PKP4Q99569 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PKP4Q99569 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.69□□□□□ -1.5
PKP4Q99569 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.69□□□□□ -1.5
PKP4Q99569 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PKP4Q99569 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.69□□□□□ -1.5
PKP4Q99569 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.69□□□□□ -1.5
PKP4Q99569 AL672167.2-201ENST00000377164 879 ntBASIC5.69□□□□□ -1.5
PKP4Q99569 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PKP4Q99569 SUGT1P2-201ENST00000379452 992 ntBASIC5.69□□□□□ -1.5
PKP4Q99569 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.69□□□□□ -1.5
PKP4Q99569 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.69□□□□□ -1.5
PKP4Q99569 U3.23-201ENST00000391132 200 ntBASIC5.69□□□□□ -1.5
PKP4Q99569 AL136116.2-201ENST00000404020 785 ntBASIC5.69□□□□□ -1.5
PKP4Q99569 RN7SKP240-201ENST00000410583 375 ntBASIC5.69□□□□□ -1.5
PKP4Q99569 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.69□□□□□ -1.5
PKP4Q99569 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.69□□□□□ -1.5
PKP4Q99569 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.69□□□□□ -1.5
PKP4Q99569 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.69□□□□□ -1.5
PKP4Q99569 AC096775.1-201ENST00000437724 448 ntBASIC5.69□□□□□ -1.5
PKP4Q99569 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.69□□□□□ -1.5
PKP4Q99569 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.69□□□□□ -1.5
PKP4Q99569 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.69□□□□□ -1.5
PKP4Q99569 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.69□□□□□ -1.5
PKP4Q99569 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.69□□□□□ -1.5
PKP4Q99569 AC093166.4-201ENST00000457867 318 ntBASIC5.69□□□□□ -1.5
PKP4Q99569 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.69□□□□□ -1.5
PKP4Q99569 AGGF1P3-201ENST00000493675 1213 ntBASIC5.69□□□□□ -1.5
PKP4Q99569 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
PKP4Q99569 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.69□□□□□ -1.5
PKP4Q99569 AC114781.3-201ENST00000512083 142 ntBASIC5.69□□□□□ -1.5
PKP4Q99569 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.69□□□□□ -1.5
PKP4Q99569 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.69□□□□□ -1.5
PKP4Q99569 IGLV3-30-201ENST00000524362 298 ntBASIC5.69□□□□□ -1.5
PKP4Q99569 TRIM77BP-201ENST00000524985 1119 ntBASIC5.69□□□□□ -1.5
PKP4Q99569 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.69□□□□□ -1.5
PKP4Q99569 AC068305.2-201ENST00000550567 1205 ntBASIC5.69□□□□□ -1.5
PKP4Q99569 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.69□□□□□ -1.5
PKP4Q99569 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PKP4Q99569 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.69□□□□□ -1.5
PKP4Q99569 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.69□□□□□ -1.5
PKP4Q99569 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.69□□□□□ -1.5
PKP4Q99569 AC006115.2-201ENST00000596823 202 ntBASIC5.69□□□□□ -1.5
PKP4Q99569 AC009237.12-201ENST00000604755 742 ntBASIC5.69□□□□□ -1.5
PKP4Q99569 AC092944.2-201ENST00000605443 889 ntBASIC5.69□□□□□ -1.5
PKP4Q99569 AL138960.1-201ENST00000613838 513 ntBASIC5.69□□□□□ -1.5
PKP4Q99569 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.69□□□□□ -1.5
PKP4Q99569 AL158062.1-201ENST00000619632 745 ntBASIC5.69□□□□□ -1.5
PKP4Q99569 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.69□□□□□ -1.5
PKP4Q99569 AC243960.7-201ENST00000623532 707 ntBASIC5.69□□□□□ -1.5
PKP4Q99569 AC104820.1-201ENST00000624183 307 ntBASIC5.69□□□□□ -1.5
PKP4Q99569 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.69□□□□□ -1.5
PKP4Q99569 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.69□□□□□ -1.5
PKP4Q99569 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PKP4Q99569 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PKP4Q99569 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
PKP4Q99569 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PKP4Q99569 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PKP4Q99569 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PKP4Q99569 AL355834.1-201ENST00000556602 3965 ntBASIC5.68□□□□□ -1.5
PKP4Q99569 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PKP4Q99569 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PKP4Q99569 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.68□□□□□ -1.5
PKP4Q99569 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PKP4Q99569 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.68□□□□□ -1.5
PKP4Q99569 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PKP4Q99569 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms