Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.93□□□□□ -1.14
SIN3AQ96ST3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC7.93□□□□□ -1.14
SIN3AQ96ST3 AC137056.2-201ENST00000624055 1958 ntBASIC7.93□□□□□ -1.14
SIN3AQ96ST3 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.93□□□□□ -1.14
SIN3AQ96ST3 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
SIN3AQ96ST3 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC7.93□□□□□ -1.14
SIN3AQ96ST3 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC7.92□□□□□ -1.14
SIN3AQ96ST3 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
SIN3AQ96ST3 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SIN3AQ96ST3 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.92□□□□□ -1.14
SIN3AQ96ST3 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SIN3AQ96ST3 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SIN3AQ96ST3 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC7.92□□□□□ -1.14
SIN3AQ96ST3 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
SIN3AQ96ST3 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
SIN3AQ96ST3 MIR323A-201ENST00000362199 86 ntBASIC7.92□□□□□ -1.14
SIN3AQ96ST3 RNA5SP435-201ENST00000364044 108 ntBASIC7.92□□□□□ -1.14
SIN3AQ96ST3 SSX3-202ENST00000376893 800 ntTSL 2 BASIC7.92□□□□□ -1.14
SIN3AQ96ST3 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
SIN3AQ96ST3 PPIAP9-201ENST00000403866 498 ntBASIC7.92□□□□□ -1.14
SIN3AQ96ST3 AL133482.1-201ENST00000415988 498 ntBASIC7.92□□□□□ -1.14
SIN3AQ96ST3 PRUNEP1-201ENST00000425846 705 ntBASIC7.92□□□□□ -1.14
SIN3AQ96ST3 AC138761.5-201ENST00000433967 325 ntBASIC7.92□□□□□ -1.14
SIN3AQ96ST3 CYCSP12-201ENST00000437729 300 ntBASIC7.92□□□□□ -1.14
SIN3AQ96ST3 KRTAP8-2P-201ENST00000440620 186 ntBASIC7.92□□□□□ -1.14
SIN3AQ96ST3 AC073465.2-201ENST00000440938 498 ntBASIC7.92□□□□□ -1.14
SIN3AQ96ST3 RPS26P39-201ENST00000469206 341 ntBASIC7.92□□□□□ -1.14
SIN3AQ96ST3 EIF3LP3-201ENST00000495197 822 ntBASIC7.92□□□□□ -1.14
SIN3AQ96ST3 SCARNA20.4-201ENST00000516969 131 ntBASIC7.92□□□□□ -1.14
SIN3AQ96ST3 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.92□□□□□ -1.14
SIN3AQ96ST3 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC7.92□□□□□ -1.14
SIN3AQ96ST3 AP003080.1-202ENST00000526526 915 ntBASIC7.92□□□□□ -1.14
SIN3AQ96ST3 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC7.92□□□□□ -1.14
SIN3AQ96ST3 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
SIN3AQ96ST3 AL512624.1-201ENST00000613638 469 ntBASIC7.92□□□□□ -1.14
SIN3AQ96ST3 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
SIN3AQ96ST3 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SIN3AQ96ST3 CASC19-248ENST00000641674 1356 ntBASIC7.92□□□□□ -1.14
SIN3AQ96ST3 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC7.92□□□□□ -1.14
SIN3AQ96ST3 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
SIN3AQ96ST3 AL034546.1-201ENST00000623740 3693 ntBASIC7.91□□□□□ -1.14
SIN3AQ96ST3 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC7.91□□□□□ -1.14
SIN3AQ96ST3 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SIN3AQ96ST3 AC016745.2-201ENST00000608834 3443 ntBASIC7.91□□□□□ -1.14
SIN3AQ96ST3 RN7SKP162-201ENST00000363605 345 ntBASIC7.91□□□□□ -1.14
SIN3AQ96ST3 RN7SKP160-201ENST00000363804 340 ntBASIC7.91□□□□□ -1.14
SIN3AQ96ST3 BPHL-201ENST00000380368 797 ntTSL 5 BASIC7.91□□□□□ -1.14
SIN3AQ96ST3 AL390774.1-201ENST00000411924 246 ntBASIC7.91□□□□□ -1.14
SIN3AQ96ST3 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC7.91□□□□□ -1.14
SIN3AQ96ST3 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC7.91□□□□□ -1.14
SIN3AQ96ST3 CFL1P1-202ENST00000432948 411 ntBASIC7.91□□□□□ -1.14
SIN3AQ96ST3 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC7.91□□□□□ -1.14
SIN3AQ96ST3 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC7.91□□□□□ -1.14
SIN3AQ96ST3 IGBP1P3-201ENST00000447449 1000 ntBASIC7.91□□□□□ -1.14
SIN3AQ96ST3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
SIN3AQ96ST3 AC011225.1-201ENST00000457751 369 ntBASIC7.91□□□□□ -1.14
SIN3AQ96ST3 AC058823.1-201ENST00000485315 474 ntBASIC7.91□□□□□ -1.14
SIN3AQ96ST3 EIF1P7-201ENST00000487533 337 ntBASIC7.91□□□□□ -1.14
SIN3AQ96ST3 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC7.91□□□□□ -1.14
SIN3AQ96ST3 RPEP1-201ENST00000504507 658 ntBASIC7.91□□□□□ -1.14
SIN3AQ96ST3 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SIN3AQ96ST3 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC7.91□□□□□ -1.14
SIN3AQ96ST3 LDHBP3-201ENST00000514909 822 ntBASIC7.91□□□□□ -1.14
SIN3AQ96ST3 SEPT10P1-201ENST00000517342 1162 ntBASIC7.91□□□□□ -1.14
SIN3AQ96ST3 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC7.91□□□□□ -1.14
SIN3AQ96ST3 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC7.91□□□□□ -1.14
SIN3AQ96ST3 AC126177.5-201ENST00000549599 178 ntBASIC7.91□□□□□ -1.14
SIN3AQ96ST3 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC7.91□□□□□ -1.14
SIN3AQ96ST3 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC7.91□□□□□ -1.14
SIN3AQ96ST3 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC7.91□□□□□ -1.14
SIN3AQ96ST3 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC7.91□□□□□ -1.14
SIN3AQ96ST3 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.91□□□□□ -1.14
SIN3AQ96ST3 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC7.91□□□□□ -1.14
SIN3AQ96ST3 XIST-210ENST00000602863 775 ntTSL 3 BASIC7.91□□□□□ -1.14
SIN3AQ96ST3 AC079395.2-201ENST00000610982 737 ntBASIC7.91□□□□□ -1.14
SIN3AQ96ST3 MIR6133-201ENST00000617057 108 ntBASIC7.91□□□□□ -1.14
SIN3AQ96ST3 AC109583.2-201ENST00000617367 129 ntBASIC7.91□□□□□ -1.14
SIN3AQ96ST3 AC005618.4-201ENST00000625053 554 ntBASIC7.91□□□□□ -1.14
SIN3AQ96ST3 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.91□□□□□ -1.14
SIN3AQ96ST3 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC7.91□□□□□ -1.14
SIN3AQ96ST3 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SIN3AQ96ST3 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SIN3AQ96ST3 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SIN3AQ96ST3 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
SIN3AQ96ST3 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SIN3AQ96ST3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
SIN3AQ96ST3 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SIN3AQ96ST3 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC7.9□□□□□ -1.14
SIN3AQ96ST3 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SIN3AQ96ST3 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SIN3AQ96ST3 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC7.9□□□□□ -1.14
SIN3AQ96ST3 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SIN3AQ96ST3 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
SIN3AQ96ST3 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC7.9□□□□□ -1.14
SIN3AQ96ST3 AC079097.1-201ENST00000512187 1399 ntBASIC7.9□□□□□ -1.14
SIN3AQ96ST3 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
SIN3AQ96ST3 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC7.9□□□□□ -1.14
SIN3AQ96ST3 RNA5SP319-201ENST00000362768 119 ntBASIC7.9□□□□□ -1.14
SIN3AQ96ST3 SNORA51.1-201ENST00000363243 140 ntBASIC7.9□□□□□ -1.14
SIN3AQ96ST3 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms