Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.21□□□□□ -1.73
AP1S3Q96PC3 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
AP1S3Q96PC3 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
AP1S3Q96PC3 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.73
AP1S3Q96PC3 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
AP1S3Q96PC3 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.73
AP1S3Q96PC3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 RNU1-134P-201ENST00000362935 165 ntBASIC4.21□□□□□ -1.74
AP1S3Q96PC3 RNA5SP77-201ENST00000365394 120 ntBASIC4.21□□□□□ -1.74
AP1S3Q96PC3 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 RN7SKP247-201ENST00000411094 308 ntBASIC4.21□□□□□ -1.74
AP1S3Q96PC3 THEM7P-201ENST00000419556 672 ntBASIC4.21□□□□□ -1.74
AP1S3Q96PC3 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 AC019205.1-201ENST00000421830 730 ntBASIC4.21□□□□□ -1.74
AP1S3Q96PC3 RPL34P6-201ENST00000432390 345 ntBASIC4.21□□□□□ -1.74
AP1S3Q96PC3 TMEM183AP1-205ENST00000432739 290 ntBASIC4.21□□□□□ -1.74
AP1S3Q96PC3 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 HMGN1P32-201ENST00000441744 256 ntBASIC4.21□□□□□ -1.74
AP1S3Q96PC3 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 WDR82P2-201ENST00000444540 928 ntBASIC4.21□□□□□ -1.74
AP1S3Q96PC3 OR7E116P-201ENST00000448529 957 ntBASIC4.21□□□□□ -1.74
AP1S3Q96PC3 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 PSAT1P4-201ENST00000466500 526 ntBASIC4.21□□□□□ -1.74
AP1S3Q96PC3 RN7SL790P-201ENST00000474043 298 ntBASIC4.21□□□□□ -1.74
AP1S3Q96PC3 AC117500.1-201ENST00000497352 755 ntBASIC4.21□□□□□ -1.74
AP1S3Q96PC3 AC021146.10-201ENST00000515628 706 ntBASIC4.21□□□□□ -1.74
AP1S3Q96PC3 SNORA74.1-201ENST00000516320 180 ntBASIC4.21□□□□□ -1.74
AP1S3Q96PC3 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 AC131935.1-201ENST00000524621 333 ntBASIC4.21□□□□□ -1.74
AP1S3Q96PC3 OR4A17P-201ENST00000526032 904 ntBASIC4.21□□□□□ -1.74
AP1S3Q96PC3 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 AC005632.2-201ENST00000564271 828 ntBASIC4.21□□□□□ -1.74
AP1S3Q96PC3 MRPL45P2-203ENST00000573318 473 ntBASIC4.21□□□□□ -1.74
AP1S3Q96PC3 AC024267.2-201ENST00000582737 417 ntBASIC4.21□□□□□ -1.74
AP1S3Q96PC3 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 AL591222.2-201ENST00000604443 754 ntBASIC4.21□□□□□ -1.74
AP1S3Q96PC3 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 AL021918.2-201ENST00000613415 194 ntBASIC4.21□□□□□ -1.74
AP1S3Q96PC3 MIR6736-201ENST00000616799 59 ntBASIC4.21□□□□□ -1.74
AP1S3Q96PC3 AP001962.1-201ENST00000624114 559 ntBASIC4.21□□□□□ -1.74
AP1S3Q96PC3 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.21□□□□□ -1.74
AP1S3Q96PC3 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 AC018717.1-201ENST00000457712 1505 ntBASIC4.21□□□□□ -1.74
AP1S3Q96PC3 AC117409.1-201ENST00000470499 1310 ntBASIC4.21□□□□□ -1.74
AP1S3Q96PC3 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
AP1S3Q96PC3 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 MFSD8-239ENST00000641590 2479 ntBASIC4.2□□□□□ -1.74
AP1S3Q96PC3 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 DLD-205ENST00000440410 1993 ntTSL 2 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 AC007938.2-201ENST00000604666 2634 ntBASIC4.2□□□□□ -1.74
AP1S3Q96PC3 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 PSMA6P1-201ENST00000400275 741 ntBASIC4.2□□□□□ -1.74
AP1S3Q96PC3 AL133482.1-201ENST00000415988 498 ntBASIC4.2□□□□□ -1.74
AP1S3Q96PC3 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 DEFA9P-201ENST00000433042 285 ntBASIC4.2□□□□□ -1.74
AP1S3Q96PC3 AC010086.1-201ENST00000437359 1052 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms