Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL21A1Q96P44 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL21A1Q96P44 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.35□□□□□ -1.55
COL21A1Q96P44 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL21A1Q96P44 OR7E101P-201ENST00000400428 513 ntBASIC5.35□□□□□ -1.55
COL21A1Q96P44 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.35□□□□□ -1.55
COL21A1Q96P44 SLC20A1P1-201ENST00000413906 956 ntBASIC5.35□□□□□ -1.55
COL21A1Q96P44 MRPL53P1-201ENST00000414323 319 ntBASIC5.35□□□□□ -1.55
COL21A1Q96P44 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.35□□□□□ -1.55
COL21A1Q96P44 AL512637.1-201ENST00000439523 1231 ntBASIC5.35□□□□□ -1.55
COL21A1Q96P44 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.35□□□□□ -1.55
COL21A1Q96P44 AC011476.1-201ENST00000466725 307 ntBASIC5.35□□□□□ -1.55
COL21A1Q96P44 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.35□□□□□ -1.55
COL21A1Q96P44 GAPDHP62-201ENST00000515313 990 ntBASIC5.35□□□□□ -1.55
COL21A1Q96P44 AC010487.1-201ENST00000594408 1172 ntBASIC5.35□□□□□ -1.55
COL21A1Q96P44 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
COL21A1Q96P44 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL21A1Q96P44 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
COL21A1Q96P44 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL21A1Q96P44 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL21A1Q96P44 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
COL21A1Q96P44 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL21A1Q96P44 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL21A1Q96P44 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
COL21A1Q96P44 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.34□□□□□ -1.55
COL21A1Q96P44 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.34□□□□□ -1.55
COL21A1Q96P44 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.34□□□□□ -1.55
COL21A1Q96P44 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL21A1Q96P44 OR52B3P-201ENST00000314715 928 ntBASIC5.34□□□□□ -1.55
COL21A1Q96P44 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
COL21A1Q96P44 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.34□□□□□ -1.55
COL21A1Q96P44 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
COL21A1Q96P44 RPS3AP2-201ENST00000407190 754 ntBASIC5.34□□□□□ -1.55
COL21A1Q96P44 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.34□□□□□ -1.55
COL21A1Q96P44 AC245060.4-201ENST00000413293 1121 ntBASIC5.34□□□□□ -1.55
COL21A1Q96P44 REREP1Y-201ENST00000422655 198 ntBASIC5.34□□□□□ -1.55
COL21A1Q96P44 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.34□□□□□ -1.55
COL21A1Q96P44 REREP2Y-201ENST00000439103 200 ntBASIC5.34□□□□□ -1.55
COL21A1Q96P44 AC016724.1-201ENST00000453215 421 ntBASIC5.34□□□□□ -1.55
COL21A1Q96P44 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.34□□□□□ -1.55
COL21A1Q96P44 RPS7P6-201ENST00000485777 579 ntBASIC5.34□□□□□ -1.55
COL21A1Q96P44 DUTP1-201ENST00000493631 470 ntBASIC5.34□□□□□ -1.55
COL21A1Q96P44 NPM1P21-201ENST00000513394 762 ntBASIC5.34□□□□□ -1.55
COL21A1Q96P44 SNORA70.20-201ENST00000516848 126 ntBASIC5.34□□□□□ -1.55
COL21A1Q96P44 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.34□□□□□ -1.55
COL21A1Q96P44 AC138832.1-201ENST00000522871 556 ntBASIC5.34□□□□□ -1.55
COL21A1Q96P44 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.34□□□□□ -1.55
COL21A1Q96P44 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.34□□□□□ -1.55
COL21A1Q96P44 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
COL21A1Q96P44 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.34□□□□□ -1.55
COL21A1Q96P44 AC079600.1-201ENST00000550326 297 ntBASIC5.34□□□□□ -1.55
COL21A1Q96P44 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.34□□□□□ -1.55
COL21A1Q96P44 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.34□□□□□ -1.55
COL21A1Q96P44 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL21A1Q96P44 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL21A1Q96P44 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL21A1Q96P44 MIR6861-201ENST00000618657 64 ntBASIC5.34□□□□□ -1.55
COL21A1Q96P44 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL21A1Q96P44 AC104964.3-201ENST00000606115 2860 ntBASIC5.34□□□□□ -1.55
COL21A1Q96P44 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL21A1Q96P44 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL21A1Q96P44 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.34□□□□□ -1.55
COL21A1Q96P44 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.34□□□□□ -1.56
COL21A1Q96P44 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.34□□□□□ -1.56
COL21A1Q96P44 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
COL21A1Q96P44 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.34□□□□□ -1.56
COL21A1Q96P44 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.34□□□□□ -1.56
COL21A1Q96P44 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
COL21A1Q96P44 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
COL21A1Q96P44 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL21A1Q96P44 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
COL21A1Q96P44 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.33□□□□□ -1.56
COL21A1Q96P44 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL21A1Q96P44 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL21A1Q96P44 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL21A1Q96P44 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL21A1Q96P44 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.33□□□□□ -1.56
COL21A1Q96P44 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.33□□□□□ -1.56
COL21A1Q96P44 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL21A1Q96P44 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.33□□□□□ -1.56
COL21A1Q96P44 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL21A1Q96P44 SNORA70.6-201ENST00000383934 134 ntBASIC5.33□□□□□ -1.56
COL21A1Q96P44 LYPLA1P3-201ENST00000402650 695 ntBASIC5.33□□□□□ -1.56
COL21A1Q96P44 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.33□□□□□ -1.56
COL21A1Q96P44 GPS2P1-201ENST00000411761 986 ntBASIC5.33□□□□□ -1.56
COL21A1Q96P44 RPS3P2-201ENST00000421346 701 ntBASIC5.33□□□□□ -1.56
COL21A1Q96P44 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.33□□□□□ -1.56
COL21A1Q96P44 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.33□□□□□ -1.56
COL21A1Q96P44 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.33□□□□□ -1.56
COL21A1Q96P44 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.33□□□□□ -1.56
COL21A1Q96P44 RPS23P2-201ENST00000463671 415 ntBASIC5.33□□□□□ -1.56
COL21A1Q96P44 NENFP3-201ENST00000503735 313 ntBASIC5.33□□□□□ -1.56
COL21A1Q96P44 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.33□□□□□ -1.56
COL21A1Q96P44 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.33□□□□□ -1.56
COL21A1Q96P44 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.33□□□□□ -1.56
COL21A1Q96P44 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL21A1Q96P44 IGLV3-30-201ENST00000524362 298 ntBASIC5.33□□□□□ -1.56
COL21A1Q96P44 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.33□□□□□ -1.56
COL21A1Q96P44 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.33□□□□□ -1.56
COL21A1Q96P44 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms