Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 snoZ40.1-201ENST00000364540 72 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 RNU6-1215P-201ENST00000384441 102 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 Y_RNA.553-201ENST00000384670 102 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 ATP5HP3-201ENST00000396994 486 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 RPL23AP59-201ENST00000399415 461 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 AL121977.1-201ENST00000401636 979 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 AL079342.2-201ENST00000403367 482 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 AL031577.2-201ENST00000404133 280 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 AL079341.1-201ENST00000404701 1207 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 RNU6-757P-201ENST00000410334 100 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 NPM1P11-201ENST00000417106 855 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 AC008753.1-201ENST00000423096 284 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 MTND1P4-201ENST00000435196 415 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 MTATP6P13-201ENST00000438531 667 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 RPL7AP71-201ENST00000451120 739 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 CCNJP2-201ENST00000457810 1163 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 AC022730.1-201ENST00000473114 568 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 RPL7P16-201ENST00000479738 738 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 NDUFA5P2-201ENST00000519723 344 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 ISCA1P3-201ENST00000577104 373 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 AC068020.1-201ENST00000594215 661 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 AC006539.2-201ENST00000601729 572 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 AC130352.1-201ENST00000602979 661 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 AC068944.2-201ENST00000610373 403 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 VN1R74P-201ENST00000613259 503 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 AL139418.1-201ENST00000613613 177 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 AL356121.2-201ENST00000624715 780 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AC000367.1-201ENST00000452711 1766 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AL078595.2-201ENST00000605309 1780 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 VN2R3P-201ENST00000422626 1412 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AC073055.1-201ENST00000456901 1621 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 RN7SKP130-201ENST00000364924 301 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 MIR142-201ENST00000384835 87 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 CHMP1B2P-201ENST00000399581 597 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 TANK-206ENST00000406287 875 ntTSL 5 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 RPSAP60-201ENST00000415403 880 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AC006065.1-201ENST00000422539 802 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms