Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 AL121950.1-201ENST00000624993 2077 ntBASIC5.62□□□□□ -1.51
VPS33AQ96AX1 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 MFSD8-239ENST00000641590 2479 ntBASIC5.62□□□□□ -1.51
VPS33AQ96AX1 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 RN7SKP78-201ENST00000364711 318 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AL139805.1-201ENST00000407837 289 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 GAPDHP19-201ENST00000431768 1005 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AC138761.5-201ENST00000433967 325 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AC099670.2-201ENST00000435130 321 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AC096775.1-201ENST00000437724 448 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AC245291.3-201ENST00000443400 292 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 FTLP8-201ENST00000446770 267 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AC002553.3-201ENST00000453002 341 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AC004129.2-201ENST00000457229 287 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AC006539.1-201ENST00000481419 501 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AC008629.2-201ENST00000503783 483 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 RNU6-760P-201ENST00000516078 97 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 SNORA74.1-201ENST00000516320 180 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AC067904.2-201ENST00000517322 1283 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AC109635.6-201ENST00000525487 1113 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AL121594.2-201ENST00000541658 472 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 HSPA8P14-201ENST00000552265 1805 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 VPS35P1-201ENST00000563400 1518 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AC073333.2-201ENST00000603589 769 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AC006363.1-201ENST00000603806 463 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AL353729.2-201ENST00000605859 1249 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AL022394.1-201ENST00000606979 292 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AL080312.2-201ENST00000613001 630 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AC073575.2-201ENST00000614212 627 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AL445670.1-201ENST00000618889 801 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AC019080.5-201ENST00000624891 757 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AC092159.4-201ENST00000624944 550 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 LINC01613-201ENST00000561476 2780 ntBASIC5.61□□□□□ -1.51
VPS33AQ96AX1 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS33AQ96AX1 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 FBXL21-201ENST00000297158 1305 ntBASIC5.6□□□□□ -1.51
VPS33AQ96AX1 AP004607.3-201ENST00000530354 3915 ntBASIC5.6□□□□□ -1.51
VPS33AQ96AX1 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 OR5T3-201ENST00000303059 1023 ntBASIC5.6□□□□□ -1.51
VPS33AQ96AX1 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 RNU1-134P-201ENST00000362935 165 ntBASIC5.6□□□□□ -1.51
VPS33AQ96AX1 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 RNA5SP91-201ENST00000390902 119 ntBASIC5.6□□□□□ -1.51
VPS33AQ96AX1 RPL5P19-201ENST00000404228 893 ntBASIC5.6□□□□□ -1.51
VPS33AQ96AX1 AL589655.1-201ENST00000405398 482 ntBASIC5.6□□□□□ -1.51
VPS33AQ96AX1 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 VN1R20P-201ENST00000425215 966 ntBASIC5.6□□□□□ -1.51
VPS33AQ96AX1 AL606490.7-201ENST00000433136 191 ntBASIC5.6□□□□□ -1.51
VPS33AQ96AX1 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.6□□□□□ -1.51
VPS33AQ96AX1 RPS4XP17-201ENST00000479057 754 ntBASIC5.6□□□□□ -1.51
VPS33AQ96AX1 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 AC138517.1-201ENST00000515724 568 ntBASIC5.6□□□□□ -1.51
VPS33AQ96AX1 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS33AQ96AX1 AC022826.1-201ENST00000519383 805 ntBASIC5.6□□□□□ -1.51
VPS33AQ96AX1 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms