Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.37□□□□□ -1.55
PTP4A1Q93096 RSU1P1-201ENST00000453416 441 ntBASIC5.37□□□□□ -1.55
PTP4A1Q93096 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.37□□□□□ -1.55
PTP4A1Q93096 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.37□□□□□ -1.55
PTP4A1Q93096 AC108103.1-201ENST00000511286 446 ntBASIC5.37□□□□□ -1.55
PTP4A1Q93096 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.37□□□□□ -1.55
PTP4A1Q93096 RNU6-491P-201ENST00000516099 110 ntBASIC5.37□□□□□ -1.55
PTP4A1Q93096 RNU6-751P-201ENST00000516382 101 ntBASIC5.37□□□□□ -1.55
PTP4A1Q93096 snoU109.6-201ENST00000516831 118 ntBASIC5.37□□□□□ -1.55
PTP4A1Q93096 AC067904.2-201ENST00000517322 1283 ntBASIC5.37□□□□□ -1.55
PTP4A1Q93096 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.37□□□□□ -1.55
PTP4A1Q93096 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.37□□□□□ -1.55
PTP4A1Q93096 AC021269.1-201ENST00000526860 705 ntBASIC5.37□□□□□ -1.55
PTP4A1Q93096 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.37□□□□□ -1.55
PTP4A1Q93096 OR4A41P-201ENST00000533053 928 ntBASIC5.37□□□□□ -1.55
PTP4A1Q93096 AC121758.1-202ENST00000556917 658 ntBASIC5.37□□□□□ -1.55
PTP4A1Q93096 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.37□□□□□ -1.55
PTP4A1Q93096 AC007346.2-201ENST00000564816 892 ntBASIC5.37□□□□□ -1.55
PTP4A1Q93096 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.37□□□□□ -1.55
PTP4A1Q93096 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.37□□□□□ -1.55
PTP4A1Q93096 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.37□□□□□ -1.55
PTP4A1Q93096 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.37□□□□□ -1.55
PTP4A1Q93096 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
PTP4A1Q93096 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.37□□□□□ -1.55
PTP4A1Q93096 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.37□□□□□ -1.55
PTP4A1Q93096 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTP4A1Q93096 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTP4A1Q93096 DNM1P47-203ENST00000571780 12667 ntBASIC5.37□□□□□ -1.55
PTP4A1Q93096 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.37□□□□□ -1.55
PTP4A1Q93096 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.37□□□□□ -1.55
PTP4A1Q93096 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
PTP4A1Q93096 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTP4A1Q93096 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PTP4A1Q93096 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
PTP4A1Q93096 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTP4A1Q93096 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTP4A1Q93096 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTP4A1Q93096 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTP4A1Q93096 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTP4A1Q93096 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTP4A1Q93096 AMZ2P2-201ENST00000406819 1057 ntBASIC5.36□□□□□ -1.55
PTP4A1Q93096 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 AC006065.1-201ENST00000422539 802 ntBASIC5.36□□□□□ -1.55
PTP4A1Q93096 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 AC007563.3-201ENST00000433233 371 ntBASIC5.36□□□□□ -1.55
PTP4A1Q93096 NDUFA5P1-201ENST00000433858 341 ntBASIC5.36□□□□□ -1.55
PTP4A1Q93096 MTND2P2-201ENST00000434633 945 ntBASIC5.36□□□□□ -1.55
PTP4A1Q93096 AC010086.1-201ENST00000437359 1052 ntBASIC5.36□□□□□ -1.55
PTP4A1Q93096 AC096632.2-201ENST00000438139 1239 ntBASIC5.36□□□□□ -1.55
PTP4A1Q93096 OR3D1P-201ENST00000438288 955 ntBASIC5.36□□□□□ -1.55
PTP4A1Q93096 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 AC010240.2-201ENST00000445363 1205 ntBASIC5.36□□□□□ -1.55
PTP4A1Q93096 AL590004.3-202ENST00000445883 451 ntBASIC5.36□□□□□ -1.55
PTP4A1Q93096 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.36□□□□□ -1.55
PTP4A1Q93096 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTP4A1Q93096 RPL29P23-201ENST00000486188 442 ntBASIC5.36□□□□□ -1.55
PTP4A1Q93096 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 MTCYBP19-201ENST00000517463 1124 ntBASIC5.36□□□□□ -1.55
PTP4A1Q93096 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 AP003033.2-201ENST00000528901 805 ntBASIC5.36□□□□□ -1.55
PTP4A1Q93096 NPIPB14P-203ENST00000532298 987 ntBASIC5.36□□□□□ -1.55
PTP4A1Q93096 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 AC060780.2-201ENST00000589047 198 ntBASIC5.36□□□□□ -1.55
PTP4A1Q93096 AC068020.1-201ENST00000594215 661 ntBASIC5.36□□□□□ -1.55
PTP4A1Q93096 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 AC124856.1-201ENST00000600819 896 ntBASIC5.36□□□□□ -1.55
PTP4A1Q93096 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 AC130352.1-201ENST00000602979 661 ntBASIC5.36□□□□□ -1.55
PTP4A1Q93096 AL022394.1-201ENST00000606979 292 ntBASIC5.36□□□□□ -1.55
PTP4A1Q93096 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 uc_338.26-201ENST00000612659 160 ntBASIC5.36□□□□□ -1.55
PTP4A1Q93096 AP002967.1-201ENST00000624203 539 ntBASIC5.36□□□□□ -1.55
PTP4A1Q93096 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTP4A1Q93096 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTP4A1Q93096 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTP4A1Q93096 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.36□□□□□ -1.55
PTP4A1Q93096 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms