Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 AL121886.1-201ENST00000358609 435 ntBASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 RPS6P23-201ENST00000413224 722 ntBASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 AL034379.1-201ENST00000423216 253 ntBASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 TMEM183AP1-205ENST00000432739 290 ntBASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 AC007679.3-201ENST00000434035 414 ntBASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 PCBP2P1-201ENST00000437262 977 ntBASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 MED28P3-201ENST00000444288 531 ntBASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 AC093166.3-201ENST00000448785 303 ntBASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 AC104849.1-201ENST00000462623 405 ntBASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 AL122020.1-201ENST00000472287 459 ntBASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 GLUD1P3-202ENST00000508551 200 ntBASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 AC114781.3-201ENST00000512083 142 ntBASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 OR5H7P-201ENST00000514084 930 ntBASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 Y_RNA.667-201ENST00000516212 107 ntBASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 RNA5SP438-201ENST00000516561 112 ntBASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 RN7SKP183-201ENST00000517169 324 ntBASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 AGGF1P7-201ENST00000562369 913 ntBASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 AC002310.3-201ENST00000569728 723 ntBASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 AC006363.1-201ENST00000603806 463 ntBASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 NANOGP3-201ENST00000605855 286 ntBASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 AC048341.3-201ENST00000619323 491 ntBASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 PWAR1-201ENST00000624188 2414 ntBASIC5.42□□□□□ -1.54
CLHC1Q8NHS4 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 AC133552.1-201ENST00000569988 4007 ntBASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 HSPD1P7-201ENST00000447985 1686 ntBASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 AL159987.1-201ENST00000347911 293 ntBASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 RNA5SP477-201ENST00000362639 119 ntBASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 RNU1-65P-201ENST00000363919 148 ntBASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 RN7SKP81-201ENST00000365603 331 ntBASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 AC007068.1-201ENST00000396690 844 ntBASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 AL158827.1-201ENST00000416300 391 ntBASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 VN1R110P-201ENST00000438988 971 ntBASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 SCARNA6.1-201ENST00000516989 238 ntBASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 MIR6889-201ENST00000613185 59 ntBASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 AC022919.1-201ENST00000624979 626 ntBASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 AC007938.2-201ENST00000604666 2634 ntBASIC5.41□□□□□ -1.54
CLHC1Q8NHS4 TCP11X1-202ENST00000622971 1372 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms