Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 AL133372.1-201ENST00000493565 745 ntBASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 AC122688.1-201ENST00000541494 223 ntBASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 AC024267.2-201ENST00000582737 417 ntBASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 MIR212-201ENST00000586026 110 ntBASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 AL078624.2-201ENST00000605063 554 ntBASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 SNORA35B-201ENST00000607417 129 ntBASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 OSTC-205ENST00000613215 876 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 AL512652.1-201ENST00000619006 500 ntBASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 AP001005.3-201ENST00000622049 129 ntBASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 AC104623.2-202ENST00000623477 4002 ntBASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 CASC19-238ENST00000641523 1558 ntBASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 AL929601.4-201ENST00000613011 1341 ntBASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 AC005042.1-201ENST00000393397 800 ntBASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 KIF4CP-201ENST00000422742 1279 ntBASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 AC073465.2-201ENST00000440938 498 ntBASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 IGBP1P3-201ENST00000447449 1000 ntBASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 GAPDHP14-201ENST00000450472 937 ntBASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 AC005165.2-201ENST00000466070 380 ntBASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 DUTP1-201ENST00000493631 470 ntBASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 RFPL4AP3-201ENST00000515267 345 ntBASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 RPS27AP18-201ENST00000515536 459 ntBASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 RNA5SP230-201ENST00000517039 122 ntBASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 PMS2P3-207ENST00000529061 717 ntBASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 AC036111.2-201ENST00000533247 901 ntBASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 AC084033.1-201ENST00000550830 633 ntBASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 SETP1-201ENST00000556014 845 ntBASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 AP005262.1-201ENST00000582646 997 ntBASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 AC124856.1-201ENST00000600819 896 ntBASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 AL512413.1-201ENST00000606489 382 ntBASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 NF1P10-201ENST00000613227 742 ntBASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 AL356752.1-201ENST00000615844 593 ntBASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 AC103703.1-201ENST00000634783 663 ntBASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 LINC01613-201ENST00000561476 2780 ntBASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 AL606537.1-201ENST00000607258 2011 ntBASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
CCDC71LQ8N9Z2 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms