Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 OR8A1-204ENST00000642111 1145 ntBASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 HMGB1P20-201ENST00000402555 677 ntBASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 LYPLA1P3-201ENST00000402650 695 ntBASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 RPS23P9-201ENST00000448848 438 ntBASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 AL445665.1-202ENST00000452436 324 ntBASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 AC094085.1-201ENST00000468914 584 ntBASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 RPS17P5-201ENST00000498293 408 ntBASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 RN7SL284P-201ENST00000498823 275 ntBASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 SUMO2P4-201ENST00000504193 276 ntBASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 DUTP7-201ENST00000507982 486 ntBASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 IGLV3-24-201ENST00000517477 197 ntBASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 MRPS16P1-201ENST00000523462 412 ntBASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 IGBP1P1-201ENST00000554337 1009 ntBASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 AL365181.4-201ENST00000609800 547 ntBASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 MRRFP1-201ENST00000435941 1675 ntBASIC6.26□□□□□ -1.41
CCDC65Q8IXS2 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 RMRPP5-201ENST00000411156 267 ntBASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 AL354868.1-201ENST00000417077 482 ntBASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 RNU6-615P-201ENST00000516065 106 ntBASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 AP005431.1-201ENST00000618479 319 ntBASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC65Q8IXS2 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms