Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC126175.1-201ENST00000617041 758 ntBASIC3.85□□□□□ -1.79
SCXQ7RTU7 AL137067.2-201ENST00000621202 131 ntBASIC3.85□□□□□ -1.79
SCXQ7RTU7 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC3.85□□□□□ -1.79
SCXQ7RTU7 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SCXQ7RTU7 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
SCXQ7RTU7 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
SCXQ7RTU7 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SCXQ7RTU7 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SCXQ7RTU7 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SCXQ7RTU7 AL353796.1-201ENST00000561542 3241 ntBASIC3.85□□□□□ -1.79
SCXQ7RTU7 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SCXQ7RTU7 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SCXQ7RTU7 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SCXQ7RTU7 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 TTC39DP-201ENST00000416781 1688 ntBASIC3.84□□□□□ -1.79
SCXQ7RTU7 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SCXQ7RTU7 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 OR9K1P-202ENST00000641111 3217 ntBASIC3.84□□□□□ -1.79
SCXQ7RTU7 AC119674.1-202ENST00000641333 1860 ntBASIC3.84□□□□□ -1.79
SCXQ7RTU7 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SCXQ7RTU7 AP001541.1-201ENST00000623322 1904 ntBASIC3.84□□□□□ -1.79
SCXQ7RTU7 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
SCXQ7RTU7 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
SCXQ7RTU7 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SCXQ7RTU7 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SCXQ7RTU7 RNA5SP375-201ENST00000362975 119 ntBASIC3.84□□□□□ -1.79
SCXQ7RTU7 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 CAV1-204ENST00000393470 598 ntTSL 4 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 ADAM24P-201ENST00000398655 2101 ntBASIC3.84□□□□□ -1.79
SCXQ7RTU7 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 SNRPEP6-201ENST00000407465 277 ntBASIC3.84□□□□□ -1.79
SCXQ7RTU7 RN7SKP229-201ENST00000410465 302 ntBASIC3.84□□□□□ -1.79
SCXQ7RTU7 RN7SKP286-201ENST00000410894 299 ntBASIC3.84□□□□□ -1.79
SCXQ7RTU7 AL354890.1-201ENST00000413730 346 ntBASIC3.84□□□□□ -1.79
SCXQ7RTU7 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 CYP4F30P-202ENST00000420048 405 ntBASIC3.84□□□□□ -1.79
SCXQ7RTU7 AC007562.1-201ENST00000421819 517 ntBASIC3.84□□□□□ -1.79
SCXQ7RTU7 AL035660.1-201ENST00000422041 222 ntBASIC3.84□□□□□ -1.79
SCXQ7RTU7 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 BX323845.3-201ENST00000428215 527 ntBASIC3.84□□□□□ -1.79
SCXQ7RTU7 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 TUBB4BP6-201ENST00000437576 479 ntBASIC3.84□□□□□ -1.79
SCXQ7RTU7 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 AC023274.2-201ENST00000445264 521 ntBASIC3.84□□□□□ -1.79
SCXQ7RTU7 RPL36AP39-201ENST00000445859 318 ntBASIC3.84□□□□□ -1.79
SCXQ7RTU7 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 HMGN1P36-201ENST00000446623 298 ntBASIC3.84□□□□□ -1.79
SCXQ7RTU7 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 RPSAP37-201ENST00000470913 821 ntBASIC3.84□□□□□ -1.79
SCXQ7RTU7 UBFD1P1-201ENST00000473259 814 ntBASIC3.84□□□□□ -1.79
SCXQ7RTU7 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 AC112191.2-201ENST00000522428 333 ntBASIC3.84□□□□□ -1.79
SCXQ7RTU7 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SCXQ7RTU7 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SCXQ7RTU7 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 NPM1P42-201ENST00000560329 862 ntBASIC3.84□□□□□ -1.79
SCXQ7RTU7 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 AC012254.3-201ENST00000591183 2117 ntBASIC3.84□□□□□ -1.79
SCXQ7RTU7 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 COX6CP7-201ENST00000597056 208 ntBASIC3.84□□□□□ -1.79
SCXQ7RTU7 AC141002.1-201ENST00000607025 279 ntBASIC3.84□□□□□ -1.79
SCXQ7RTU7 AL159169.2-201ENST00000610061 1269 ntBASIC3.84□□□□□ -1.79
SCXQ7RTU7 MIR6768-201ENST00000610734 72 ntBASIC3.84□□□□□ -1.79
SCXQ7RTU7 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SCXQ7RTU7 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SCXQ7RTU7 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SCXQ7RTU7 ING3-204ENST00000431467 1447 ntTSL 2 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC3.84□□□□□ -1.79
SCXQ7RTU7 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SCXQ7RTU7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC3.84□□□□□ -1.8
SCXQ7RTU7 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SCXQ7RTU7 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SCXQ7RTU7 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SCXQ7RTU7 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC3.84□□□□□ -1.8
SCXQ7RTU7 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SCXQ7RTU7 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SCXQ7RTU7 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SCXQ7RTU7 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SCXQ7RTU7 GNL2P1-201ENST00000451274 2190 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms