Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 RNF10P1-201ENST00000418589 369 ntBASIC8.15□□□□□ -1.11
CDC42BPAQ5VT25 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC8.15□□□□□ -1.11
CDC42BPAQ5VT25 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC8.15□□□□□ -1.11
CDC42BPAQ5VT25 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CDC42BPAQ5VT25 AC002075.1-201ENST00000457396 676 ntBASIC8.15□□□□□ -1.11
CDC42BPAQ5VT25 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC8.15□□□□□ -1.11
CDC42BPAQ5VT25 RN7SL459P-201ENST00000481078 302 ntBASIC8.15□□□□□ -1.11
CDC42BPAQ5VT25 ST13P12-201ENST00000508958 1094 ntBASIC8.15□□□□□ -1.11
CDC42BPAQ5VT25 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC8.15□□□□□ -1.11
CDC42BPAQ5VT25 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC8.15□□□□□ -1.11
CDC42BPAQ5VT25 AC027667.1-201ENST00000545814 304 ntBASIC8.15□□□□□ -1.11
CDC42BPAQ5VT25 PCNPP1-201ENST00000552501 511 ntBASIC8.15□□□□□ -1.11
CDC42BPAQ5VT25 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC8.15□□□□□ -1.11
CDC42BPAQ5VT25 ELOCP28-201ENST00000590044 317 ntBASIC8.15□□□□□ -1.11
CDC42BPAQ5VT25 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC8.15□□□□□ -1.11
CDC42BPAQ5VT25 MIR378J-201ENST00000611988 109 ntBASIC8.15□□□□□ -1.11
CDC42BPAQ5VT25 AL353662.3-201ENST00000625131 237 ntBASIC8.15□□□□□ -1.11
CDC42BPAQ5VT25 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42BPAQ5VT25 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
CDC42BPAQ5VT25 ZNF969P-201ENST00000510345 2341 ntBASIC8.14□□□□□ -1.11
CDC42BPAQ5VT25 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42BPAQ5VT25 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC8.14□□□□□ -1.11
CDC42BPAQ5VT25 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42BPAQ5VT25 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
CDC42BPAQ5VT25 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42BPAQ5VT25 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC8.14□□□□□ -1.11
CDC42BPAQ5VT25 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42BPAQ5VT25 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC8.14□□□□□ -1.11
CDC42BPAQ5VT25 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CDC42BPAQ5VT25 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC8.14□□□□□ -1.11
CDC42BPAQ5VT25 RNA5SP123-201ENST00000363244 119 ntBASIC8.14□□□□□ -1.11
CDC42BPAQ5VT25 RPS26P38-201ENST00000414476 348 ntBASIC8.14□□□□□ -1.11
CDC42BPAQ5VT25 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC8.14□□□□□ -1.11
CDC42BPAQ5VT25 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC8.14□□□□□ -1.11
CDC42BPAQ5VT25 IGHVII-44-2-201ENST00000517728 250 ntBASIC8.14□□□□□ -1.11
CDC42BPAQ5VT25 AC021006.3-201ENST00000530771 192 ntBASIC8.14□□□□□ -1.11
CDC42BPAQ5VT25 NOP10-202ENST00000557912 436 ntTSL 2 BASIC8.14□□□□□ -1.11
CDC42BPAQ5VT25 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
CDC42BPAQ5VT25 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC8.14□□□□□ -1.11
CDC42BPAQ5VT25 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 COX6B1P1-201ENST00000415962 213 ntBASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 AL390879.1-201ENST00000439143 386 ntBASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 UBE2Q2P10-201ENST00000514854 900 ntBASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 NAA60-237ENST00000615865 326 ntTSL 5 BASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 AL008638.3-201ENST00000623027 5182 ntBASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 NXF4-202ENST00000416098 1465 ntBASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42BPAQ5VT25 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 RN7SKP149-201ENST00000363008 344 ntBASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 AL353625.1-202ENST00000366273 571 ntBASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 RPL23AP17-201ENST00000401064 499 ntBASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 AC093414.1-201ENST00000434712 514 ntBASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 SNORD125-201ENST00000459538 96 ntBASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 AC009127.1-201ENST00000467090 155 ntBASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 HSPA8P14-201ENST00000552265 1805 ntBASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 LRRC37A16P-202ENST00000586022 3725 ntBASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 RNA5SP455-201ENST00000365190 119 ntBASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 SNORA51.8-201ENST00000384234 132 ntBASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 RN7SL188P-201ENST00000469842 285 ntBASIC8.12□□□□□ -1.11
CDC42BPAQ5VT25 AC096741.1-201ENST00000472250 846 ntBASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms