Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 OR6M2P-201ENST00000529831 871 ntBASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 HIGD1AP5-201ENST00000529959 259 ntBASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 RPA2P3-201ENST00000533268 770 ntBASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 AC005725.1-201ENST00000577346 2607 ntBASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 MTND2P13-201ENST00000577438 1039 ntBASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 AC008507.3-201ENST00000585753 472 ntBASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 AC015802.5-201ENST00000607478 399 ntBASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 LINC00216-201ENST00000623548 1126 ntBASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 AC129778.1-202ENST00000623812 261 ntBASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 AC129915.3-201ENST00000634128 948 ntBASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 AL591379.1-207ENST00000635982 261 ntBASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDLIM3Q53GG5 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 GUCY1B2-204ENST00000531898 1979 ntBASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 RPL31P11-201ENST00000426558 1558 ntBASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AC125238.2-201ENST00000430003 1440 ntBASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AC093225.1-201ENST00000506867 1408 ntBASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 RNU1-146P-201ENST00000364015 165 ntBASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 RNU6-1263P-201ENST00000384601 106 ntBASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 U3.23-201ENST00000391132 200 ntBASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AC021876.1-201ENST00000425959 359 ntBASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 PNKDP1-201ENST00000435914 430 ntBASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 BX679664.2-201ENST00000439282 283 ntBASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 RPL21P133-201ENST00000443666 476 ntBASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 HLA-DPA3-207ENST00000454398 229 ntBASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AC093870.1-201ENST00000506837 213 ntBASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 ATP5LP3-201ENST00000514223 304 ntBASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AC060775.1-201ENST00000518241 520 ntBASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 SEC11B-201ENST00000518383 499 ntBASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AC020937.1-201ENST00000519677 1013 ntBASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AC020978.7-201ENST00000575953 1187 ntBASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 SNORD39.2-201ENST00000579995 76 ntBASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AC020916.2-201ENST00000591242 360 ntBASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AL589863.1-201ENST00000595383 631 ntBASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 MIR6085-201ENST00000618314 110 ntBASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AC118658.2-201ENST00000618697 459 ntBASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AL109620.1-201ENST00000618738 1197 ntBASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AP000720.1-201ENST00000625091 483 ntBASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 AC119674.1-220ENST00000641502 1048 ntBASIC5.09□□□□□ -1.59
PDLIM3Q53GG5 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms