Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 MIR4260-201ENST00000583107 67 ntBASIC6.32□□□□□ -1.4
UBE3AQ05086 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC6.32□□□□□ -1.4
UBE3AQ05086 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.32□□□□□ -1.4
UBE3AQ05086 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
UBE3AQ05086 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.32□□□□□ -1.4
UBE3AQ05086 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.32□□□□□ -1.4
UBE3AQ05086 AC145423.1-201ENST00000605712 336 ntBASIC6.32□□□□□ -1.4
UBE3AQ05086 AC012213.4-201ENST00000606457 354 ntBASIC6.32□□□□□ -1.4
UBE3AQ05086 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.32□□□□□ -1.4
UBE3AQ05086 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC6.32□□□□□ -1.4
UBE3AQ05086 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
UBE3AQ05086 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.32□□□□□ -1.4
UBE3AQ05086 AC092692.1-201ENST00000623625 2595 ntBASIC6.32□□□□□ -1.4
UBE3AQ05086 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.32□□□□□ -1.4
UBE3AQ05086 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.32□□□□□ -1.4
UBE3AQ05086 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
UBE3AQ05086 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.32□□□□□ -1.4
UBE3AQ05086 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
UBE3AQ05086 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
UBE3AQ05086 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
UBE3AQ05086 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.31□□□□□ -1.4
UBE3AQ05086 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
UBE3AQ05086 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
UBE3AQ05086 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
UBE3AQ05086 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.31□□□□□ -1.4
UBE3AQ05086 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
UBE3AQ05086 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.31□□□□□ -1.4
UBE3AQ05086 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
UBE3AQ05086 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.31□□□□□ -1.4
UBE3AQ05086 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
UBE3AQ05086 RNU1-19P-201ENST00000363306 165 ntBASIC6.31□□□□□ -1.4
UBE3AQ05086 SNORA27.3-201ENST00000364937 134 ntBASIC6.31□□□□□ -1.4
UBE3AQ05086 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
UBE3AQ05086 ST13P16-201ENST00000401760 781 ntBASIC6.31□□□□□ -1.4
UBE3AQ05086 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.31□□□□□ -1.4
UBE3AQ05086 TNPO1P1-201ENST00000423641 1138 ntBASIC6.31□□□□□ -1.4
UBE3AQ05086 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.31□□□□□ -1.4
UBE3AQ05086 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC6.31□□□□□ -1.4
UBE3AQ05086 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.31□□□□□ -1.4
UBE3AQ05086 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.31□□□□□ -1.4
UBE3AQ05086 RN7SL515P-201ENST00000463999 297 ntBASIC6.31□□□□□ -1.4
UBE3AQ05086 OR7E157P-201ENST00000494376 911 ntBASIC6.31□□□□□ -1.4
UBE3AQ05086 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.31□□□□□ -1.4
UBE3AQ05086 AP003080.1-202ENST00000526526 915 ntBASIC6.31□□□□□ -1.4
UBE3AQ05086 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.31□□□□□ -1.4
UBE3AQ05086 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.31□□□□□ -1.4
UBE3AQ05086 AC008147.3-201ENST00000548666 354 ntBASIC6.31□□□□□ -1.4
UBE3AQ05086 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.31□□□□□ -1.4
UBE3AQ05086 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.31□□□□□ -1.4
UBE3AQ05086 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.31□□□□□ -1.4
UBE3AQ05086 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.31□□□□□ -1.4
UBE3AQ05086 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.31□□□□□ -1.4
UBE3AQ05086 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.31□□□□□ -1.4
UBE3AQ05086 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.31□□□□□ -1.4
UBE3AQ05086 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.31□□□□□ -1.4
UBE3AQ05086 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.31□□□□□ -1.4
UBE3AQ05086 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.31□□□□□ -1.4
UBE3AQ05086 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
UBE3AQ05086 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
UBE3AQ05086 AL731556.1-201ENST00000394628 3711 ntBASIC6.31□□□□□ -1.4
UBE3AQ05086 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.31□□□□□ -1.4
UBE3AQ05086 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.31□□□□□ -1.4
UBE3AQ05086 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
UBE3AQ05086 AC137056.2-201ENST00000624055 1958 ntBASIC6.31□□□□□ -1.4
UBE3AQ05086 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
UBE3AQ05086 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
UBE3AQ05086 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
UBE3AQ05086 MTND4P21-201ENST00000453886 1357 ntBASIC6.31□□□□□ -1.4
UBE3AQ05086 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
UBE3AQ05086 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
UBE3AQ05086 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
UBE3AQ05086 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
UBE3AQ05086 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
UBE3AQ05086 AC006213.6-201ENST00000623722 4179 ntBASIC6.3□□□□□ -1.4
UBE3AQ05086 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
UBE3AQ05086 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
UBE3AQ05086 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
UBE3AQ05086 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
UBE3AQ05086 NCOA4P2-201ENST00000340589 1813 ntBASIC6.3□□□□□ -1.4
UBE3AQ05086 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
UBE3AQ05086 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.3□□□□□ -1.4
UBE3AQ05086 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
UBE3AQ05086 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
UBE3AQ05086 RNA5SP514-201ENST00000363717 111 ntBASIC6.3□□□□□ -1.4
UBE3AQ05086 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
UBE3AQ05086 SPTLC1P2-201ENST00000407089 121 ntBASIC6.3□□□□□ -1.4
UBE3AQ05086 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.3□□□□□ -1.4
UBE3AQ05086 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.3□□□□□ -1.4
UBE3AQ05086 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.3□□□□□ -1.4
UBE3AQ05086 MRPL53P1-201ENST00000414323 319 ntBASIC6.3□□□□□ -1.4
UBE3AQ05086 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
UBE3AQ05086 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.3□□□□□ -1.4
UBE3AQ05086 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.3□□□□□ -1.4
UBE3AQ05086 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.3□□□□□ -1.4
UBE3AQ05086 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC6.3□□□□□ -1.4
UBE3AQ05086 EEF1B2P6-201ENST00000445713 673 ntBASIC6.3□□□□□ -1.4
UBE3AQ05086 RAB28P2-201ENST00000454299 641 ntBASIC6.3□□□□□ -1.4
UBE3AQ05086 RPS23P6-201ENST00000466136 431 ntBASIC6.3□□□□□ -1.4
UBE3AQ05086 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
UBE3AQ05086 COPS8P2-201ENST00000473228 627 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms