Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.72□□□□□ -1.49
CBX1P83916 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.72□□□□□ -1.49
CBX1P83916 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.72□□□□□ -1.49
CBX1P83916 AC010287.1-201ENST00000566916 357 ntBASIC5.72□□□□□ -1.49
CBX1P83916 AC022884.2-201ENST00000578535 580 ntBASIC5.72□□□□□ -1.49
CBX1P83916 MIR4312-201ENST00000579909 76 ntBASIC5.72□□□□□ -1.49
CBX1P83916 AC011840.5-201ENST00000582125 771 ntBASIC5.72□□□□□ -1.49
CBX1P83916 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.72□□□□□ -1.49
CBX1P83916 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CBX1P83916 AC233280.2-201ENST00000603917 1070 ntBASIC5.72□□□□□ -1.49
CBX1P83916 OR7M1P-201ENST00000608946 533 ntBASIC5.72□□□□□ -1.49
CBX1P83916 AL365181.4-201ENST00000609800 547 ntBASIC5.72□□□□□ -1.49
CBX1P83916 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.72□□□□□ -1.49
CBX1P83916 AC096861.1-201ENST00000616652 240 ntBASIC5.72□□□□□ -1.49
CBX1P83916 AC007347.2-201ENST00000623044 180 ntBASIC5.72□□□□□ -1.49
CBX1P83916 AC005514.1-201ENST00000623521 208 ntBASIC5.72□□□□□ -1.49
CBX1P83916 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.72□□□□□ -1.49
CBX1P83916 CLUHP10-201ENST00000631979 980 ntBASIC5.72□□□□□ -1.49
CBX1P83916 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.72□□□□□ -1.49
CBX1P83916 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.72□□□□□ -1.49
CBX1P83916 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.72□□□□□ -1.49
CBX1P83916 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CBX1P83916 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.72□□□□□ -1.49
CBX1P83916 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CBX1P83916 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CBX1P83916 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.72□□□□□ -1.49
CBX1P83916 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CBX1P83916 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.72□□□□□ -1.49
CBX1P83916 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.71□□□□□ -1.49
CBX1P83916 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.71□□□□□ -1.5
CBX1P83916 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.71□□□□□ -1.5
CBX1P83916 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CBX1P83916 RN7SKP117-201ENST00000410175 264 ntBASIC5.71□□□□□ -1.5
CBX1P83916 RN7SKP125-201ENST00000410481 302 ntBASIC5.71□□□□□ -1.5
CBX1P83916 AC007738.1-201ENST00000413892 348 ntBASIC5.71□□□□□ -1.5
CBX1P83916 RPL7P56-201ENST00000429441 717 ntBASIC5.71□□□□□ -1.5
CBX1P83916 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.71□□□□□ -1.5
CBX1P83916 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC5.71□□□□□ -1.5
CBX1P83916 AC023141.8-201ENST00000442554 208 ntBASIC5.71□□□□□ -1.5
CBX1P83916 AC245291.3-201ENST00000443400 292 ntBASIC5.71□□□□□ -1.5
CBX1P83916 ZNF619P1-201ENST00000446539 752 ntBASIC5.71□□□□□ -1.5
CBX1P83916 IGBP1P3-201ENST00000447449 1000 ntBASIC5.71□□□□□ -1.5
CBX1P83916 NXT1P1-201ENST00000458481 316 ntBASIC5.71□□□□□ -1.5
CBX1P83916 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CBX1P83916 AC018645.1-201ENST00000505003 109 ntBASIC5.71□□□□□ -1.5
CBX1P83916 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.71□□□□□ -1.5
CBX1P83916 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.71□□□□□ -1.5
CBX1P83916 RNA5SP360-201ENST00000516555 118 ntBASIC5.71□□□□□ -1.5
CBX1P83916 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC5.71□□□□□ -1.5
CBX1P83916 AC024940.3-201ENST00000538551 316 ntBASIC5.71□□□□□ -1.5
CBX1P83916 AC005519.1-201ENST00000554490 601 ntBASIC5.71□□□□□ -1.5
CBX1P83916 AC091078.2-201ENST00000557145 559 ntBASIC5.71□□□□□ -1.5
CBX1P83916 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC5.71□□□□□ -1.5
CBX1P83916 FCGR1CP-201ENST00000579737 1127 ntBASIC5.71□□□□□ -1.5
CBX1P83916 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.71□□□□□ -1.5
CBX1P83916 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.71□□□□□ -1.5
CBX1P83916 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.71□□□□□ -1.5
CBX1P83916 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.71□□□□□ -1.5
CBX1P83916 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.71□□□□□ -1.5
CBX1P83916 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CBX1P83916 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.71□□□□□ -1.5
CBX1P83916 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CBX1P83916 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CBX1P83916 AC063976.2-201ENST00000425667 3556 ntBASIC5.71□□□□□ -1.5
CBX1P83916 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CBX1P83916 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CBX1P83916 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.71□□□□□ -1.5
CBX1P83916 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CBX1P83916 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.71□□□□□ -1.5
CBX1P83916 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.71□□□□□ -1.5
CBX1P83916 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.71□□□□□ -1.5
CBX1P83916 AL022322.2-201ENST00000624072 20397 ntBASIC5.71□□□□□ -1.5
CBX1P83916 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.71□□□□□ -1.5
CBX1P83916 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CBX1P83916 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CBX1P83916 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.7□□□□□ -1.5
CBX1P83916 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CBX1P83916 AC120338.1-201ENST00000625074 1541 ntBASIC5.7□□□□□ -1.5
CBX1P83916 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CBX1P83916 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CBX1P83916 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CBX1P83916 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CBX1P83916 RN7SKP247-201ENST00000411094 308 ntBASIC5.7□□□□□ -1.5
CBX1P83916 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CBX1P83916 CYCSP10-201ENST00000417973 294 ntBASIC5.7□□□□□ -1.5
CBX1P83916 AL161742.1-201ENST00000418154 584 ntBASIC5.7□□□□□ -1.5
CBX1P83916 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.7□□□□□ -1.5
CBX1P83916 CHCHD4P5-201ENST00000436684 427 ntBASIC5.7□□□□□ -1.5
CBX1P83916 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.7□□□□□ -1.5
CBX1P83916 OR7E116P-201ENST00000448529 957 ntBASIC5.7□□□□□ -1.5
CBX1P83916 AL133351.3-201ENST00000454998 193 ntBASIC5.7□□□□□ -1.5
CBX1P83916 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.7□□□□□ -1.5
CBX1P83916 AP000797.2-201ENST00000475768 606 ntBASIC5.7□□□□□ -1.5
CBX1P83916 ATP5LP5-201ENST00000483050 299 ntBASIC5.7□□□□□ -1.5
CBX1P83916 AC083795.1-201ENST00000491760 320 ntBASIC5.7□□□□□ -1.5
CBX1P83916 AC106760.2-201ENST00000504159 619 ntBASIC5.7□□□□□ -1.5
CBX1P83916 AC073648.3-201ENST00000504939 925 ntBASIC5.7□□□□□ -1.5
CBX1P83916 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
CBX1P83916 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC5.7□□□□□ -1.5
CBX1P83916 AC089984.3-201ENST00000552838 363 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms