Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 HMGB3P16-201ENST00000508037 287 ntBASIC4.27□□□□□ -1.73
CCL20P78556 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.27□□□□□ -1.73
CCL20P78556 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC4.27□□□□□ -1.73
CCL20P78556 AC084851.2-201ENST00000530377 364 ntBASIC4.27□□□□□ -1.73
CCL20P78556 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC4.27□□□□□ -1.73
CCL20P78556 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.27□□□□□ -1.73
CCL20P78556 BNIP3P1-201ENST00000547295 580 ntBASIC4.27□□□□□ -1.73
CCL20P78556 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC4.27□□□□□ -1.73
CCL20P78556 HSPE1P2-201ENST00000554777 306 ntBASIC4.27□□□□□ -1.73
CCL20P78556 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.27□□□□□ -1.73
CCL20P78556 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.27□□□□□ -1.73
CCL20P78556 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC4.27□□□□□ -1.73
CCL20P78556 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.27□□□□□ -1.73
CCL20P78556 MIR4311-201ENST00000580794 100 ntBASIC4.27□□□□□ -1.73
CCL20P78556 MIR4732-201ENST00000581873 76 ntBASIC4.27□□□□□ -1.73
CCL20P78556 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC4.27□□□□□ -1.73
CCL20P78556 H3F3BP2-201ENST00000583907 357 ntBASIC4.27□□□□□ -1.73
CCL20P78556 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC4.27□□□□□ -1.73
CCL20P78556 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC4.27□□□□□ -1.73
CCL20P78556 AC063977.7-201ENST00000594454 337 ntBASIC4.27□□□□□ -1.73
CCL20P78556 AC244107.2-201ENST00000611773 76 ntBASIC4.27□□□□□ -1.73
CCL20P78556 AL080312.2-201ENST00000613001 630 ntBASIC4.27□□□□□ -1.73
CCL20P78556 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCL20P78556 AC090607.5-201ENST00000615692 224 ntBASIC4.27□□□□□ -1.73
CCL20P78556 AL122023.1-201ENST00000622847 530 ntBASIC4.27□□□□□ -1.73
CCL20P78556 AP003108.4-201ENST00000623917 878 ntBASIC4.27□□□□□ -1.73
CCL20P78556 AP000648.2-201ENST00000624182 404 ntBASIC4.27□□□□□ -1.73
CCL20P78556 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.27□□□□□ -1.73
CCL20P78556 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCL20P78556 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCL20P78556 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.27□□□□□ -1.73
CCL20P78556 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CCL20P78556 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CCL20P78556 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCL20P78556 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCL20P78556 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCL20P78556 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCL20P78556 LINC01613-201ENST00000561476 2780 ntBASIC4.26□□□□□ -1.73
CCL20P78556 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.26□□□□□ -1.73
CCL20P78556 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
CCL20P78556 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCL20P78556 ICE2P1-201ENST00000512800 1849 ntBASIC4.26□□□□□ -1.73
CCL20P78556 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCL20P78556 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
CCL20P78556 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCL20P78556 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCL20P78556 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CCL20P78556 AL159987.1-201ENST00000347911 293 ntBASIC4.26□□□□□ -1.73
CCL20P78556 AC016739.1-201ENST00000405359 345 ntBASIC4.26□□□□□ -1.73
CCL20P78556 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC4.26□□□□□ -1.73
CCL20P78556 AC007161.1-204ENST00000423039 460 ntBASIC4.26□□□□□ -1.73
CCL20P78556 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.26□□□□□ -1.73
CCL20P78556 BMS1P11-201ENST00000442351 885 ntBASIC4.26□□□□□ -1.73
CCL20P78556 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.26□□□□□ -1.73
CCL20P78556 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.26□□□□□ -1.73
CCL20P78556 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.26□□□□□ -1.73
CCL20P78556 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.26□□□□□ -1.73
CCL20P78556 BMS1P9-201ENST00000457640 885 ntBASIC4.26□□□□□ -1.73
CCL20P78556 AL591473.1-201ENST00000464297 313 ntBASIC4.26□□□□□ -1.73
CCL20P78556 RN7SL583P-201ENST00000475692 287 ntBASIC4.26□□□□□ -1.73
CCL20P78556 AC092865.4-201ENST00000477936 615 ntBASIC4.26□□□□□ -1.73
CCL20P78556 AC135999.1-201ENST00000478962 479 ntBASIC4.26□□□□□ -1.73
CCL20P78556 AC093827.1-201ENST00000480094 861 ntBASIC4.26□□□□□ -1.73
CCL20P78556 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.26□□□□□ -1.73
CCL20P78556 AC105391.1-201ENST00000503155 1045 ntBASIC4.26□□□□□ -1.73
CCL20P78556 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.26□□□□□ -1.73
CCL20P78556 SETP21-201ENST00000514799 892 ntBASIC4.26□□□□□ -1.73
CCL20P78556 RNU6-1334P-201ENST00000516032 105 ntBASIC4.26□□□□□ -1.73
CCL20P78556 RNA5SP464-201ENST00000516251 108 ntBASIC4.26□□□□□ -1.73
CCL20P78556 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC4.26□□□□□ -1.73
CCL20P78556 IGHVII-49-1-201ENST00000521760 224 ntBASIC4.26□□□□□ -1.73
CCL20P78556 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.26□□□□□ -1.73
CCL20P78556 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.26□□□□□ -1.73
CCL20P78556 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.26□□□□□ -1.73
CCL20P78556 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.26□□□□□ -1.73
CCL20P78556 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.26□□□□□ -1.73
CCL20P78556 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.26□□□□□ -1.73
CCL20P78556 AC025283.1-201ENST00000572039 734 ntBASIC4.26□□□□□ -1.73
CCL20P78556 MED31-202ENST00000574128 619 ntTSL 3 BASIC4.26□□□□□ -1.73
CCL20P78556 OR1E3-201ENST00000575608 948 ntBASIC4.26□□□□□ -1.73
CCL20P78556 AC073333.2-201ENST00000603589 769 ntBASIC4.26□□□□□ -1.73
CCL20P78556 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC4.26□□□□□ -1.73
CCL20P78556 Z95327.3-201ENST00000610385 572 ntBASIC4.26□□□□□ -1.73
CCL20P78556 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCL20P78556 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.26□□□□□ -1.73
CCL20P78556 AC129915.3-201ENST00000634128 948 ntBASIC4.26□□□□□ -1.73
CCL20P78556 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.26□□□□□ -1.73
CCL20P78556 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CCL20P78556 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CCL20P78556 MT-RNR2-201ENST00000387347 1559 ntBASIC4.26□□□□□ -1.73
CCL20P78556 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
CCL20P78556 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CCL20P78556 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.26□□□□□ -1.73
CCL20P78556 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.26□□□□□ -1.73
CCL20P78556 AC007996.1-201ENST00000620414 2821 ntBASIC4.26□□□□□ -1.73
CCL20P78556 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CCL20P78556 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CCL20P78556 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCL20P78556 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.25□□□□□ -1.73
CCL20P78556 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms