Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CCNA1P78396 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.49□□□□□ -1.37
CCNA1P78396 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CCNA1P78396 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCNA1P78396 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.49□□□□□ -1.37
CCNA1P78396 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCNA1P78396 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCNA1P78396 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CCNA1P78396 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCNA1P78396 MIR551A-201ENST00000385042 96 ntBASIC6.49□□□□□ -1.37
CCNA1P78396 AC005042.1-201ENST00000393397 800 ntBASIC6.49□□□□□ -1.37
CCNA1P78396 AL133270.1-201ENST00000402635 279 ntBASIC6.49□□□□□ -1.37
CCNA1P78396 RN7SKP213-201ENST00000410746 298 ntBASIC6.49□□□□□ -1.37
CCNA1P78396 TMA16P2-201ENST00000413187 601 ntBASIC6.49□□□□□ -1.37
CCNA1P78396 RPS6P23-201ENST00000413224 722 ntBASIC6.49□□□□□ -1.37
CCNA1P78396 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.49□□□□□ -1.37
CCNA1P78396 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.49□□□□□ -1.37
CCNA1P78396 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.49□□□□□ -1.37
CCNA1P78396 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.49□□□□□ -1.37
CCNA1P78396 AC004453.1-201ENST00000487895 408 ntBASIC6.49□□□□□ -1.37
CCNA1P78396 RPL17P2-201ENST00000491913 451 ntBASIC6.49□□□□□ -1.37
CCNA1P78396 RN7SL447P-201ENST00000494711 245 ntBASIC6.49□□□□□ -1.37
CCNA1P78396 AC072052.1-201ENST00000496556 306 ntBASIC6.49□□□□□ -1.37
CCNA1P78396 AC008953.1-201ENST00000497334 318 ntBASIC6.49□□□□□ -1.37
CCNA1P78396 FTH1P8-201ENST00000498161 514 ntBASIC6.49□□□□□ -1.37
CCNA1P78396 PGAM1P13-201ENST00000507497 754 ntBASIC6.49□□□□□ -1.37
CCNA1P78396 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.49□□□□□ -1.37
CCNA1P78396 AL049779.3-201ENST00000557141 606 ntBASIC6.49□□□□□ -1.37
CCNA1P78396 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.49□□□□□ -1.37
CCNA1P78396 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.49□□□□□ -1.37
CCNA1P78396 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.49□□□□□ -1.37
CCNA1P78396 AP000550.3-201ENST00000637734 379 ntBASIC6.49□□□□□ -1.37
CCNA1P78396 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.49□□□□□ -1.37
CCNA1P78396 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCNA1P78396 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.49□□□□□ -1.37
CCNA1P78396 AP000547.3-204ENST00000588548 2523 ntBASIC6.49□□□□□ -1.37
CCNA1P78396 AL121768.1-201ENST00000613917 2544 ntBASIC6.49□□□□□ -1.37
CCNA1P78396 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CCNA1P78396 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCNA1P78396 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
CCNA1P78396 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CCNA1P78396 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
CCNA1P78396 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
CCNA1P78396 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCNA1P78396 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCNA1P78396 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCNA1P78396 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.48□□□□□ -1.37
CCNA1P78396 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCNA1P78396 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCNA1P78396 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCNA1P78396 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CCNA1P78396 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCNA1P78396 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.48□□□□□ -1.37
CCNA1P78396 RNU1-77P-201ENST00000390868 162 ntBASIC6.48□□□□□ -1.37
CCNA1P78396 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.48□□□□□ -1.37
CCNA1P78396 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.48□□□□□ -1.37
CCNA1P78396 RANP7-201ENST00000418085 644 ntBASIC6.48□□□□□ -1.37
CCNA1P78396 AL133325.1-201ENST00000421090 382 ntBASIC6.48□□□□□ -1.37
CCNA1P78396 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.48□□□□□ -1.37
CCNA1P78396 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.48□□□□□ -1.37
CCNA1P78396 AC004129.2-201ENST00000457229 287 ntBASIC6.48□□□□□ -1.37
CCNA1P78396 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.48□□□□□ -1.37
CCNA1P78396 GOLGA5P1-201ENST00000507317 980 ntBASIC6.48□□□□□ -1.37
CCNA1P78396 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.48□□□□□ -1.37
CCNA1P78396 AC021733.2-201ENST00000518830 497 ntBASIC6.48□□□□□ -1.37
CCNA1P78396 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
CCNA1P78396 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.48□□□□□ -1.37
CCNA1P78396 AL121594.2-201ENST00000541658 472 ntBASIC6.48□□□□□ -1.37
CCNA1P78396 HSPE1P2-201ENST00000554777 306 ntBASIC6.48□□□□□ -1.37
CCNA1P78396 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.48□□□□□ -1.37
CCNA1P78396 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.48□□□□□ -1.37
CCNA1P78396 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.48□□□□□ -1.37
CCNA1P78396 MIR6798-201ENST00000612887 67 ntBASIC6.48□□□□□ -1.37
CCNA1P78396 AC068870.2-201ENST00000620635 389 ntBASIC6.48□□□□□ -1.37
CCNA1P78396 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.48□□□□□ -1.37
CCNA1P78396 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCNA1P78396 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCNA1P78396 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCNA1P78396 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.48□□□□□ -1.37
CCNA1P78396 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.48□□□□□ -1.37
CCNA1P78396 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCNA1P78396 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.48□□□□□ -1.37
CCNA1P78396 AL161912.4-201ENST00000623889 2468 ntBASIC6.48□□□□□ -1.37
CCNA1P78396 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCNA1P78396 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.47□□□□□ -1.37
CCNA1P78396 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCNA1P78396 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.47□□□□□ -1.37
CCNA1P78396 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCNA1P78396 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
CCNA1P78396 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.47□□□□□ -1.37
CCNA1P78396 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCNA1P78396 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CCNA1P78396 RN7SKP273-201ENST00000411392 314 ntBASIC6.47□□□□□ -1.37
CCNA1P78396 GABARAPL3-201ENST00000412799 354 ntBASIC6.47□□□□□ -1.37
CCNA1P78396 METTL15P3-201ENST00000415522 1221 ntBASIC6.47□□□□□ -1.37
CCNA1P78396 AL590399.4-201ENST00000436561 601 ntBASIC6.47□□□□□ -1.37
CCNA1P78396 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.47□□□□□ -1.37
CCNA1P78396 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.47□□□□□ -1.37
CCNA1P78396 AURKAPS1-201ENST00000451805 1212 ntBASIC6.47□□□□□ -1.37
CCNA1P78396 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms