Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.96□□□□□ -1.62
UBA52P62987 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
UBA52P62987 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
UBA52P62987 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
UBA52P62987 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
UBA52P62987 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
UBA52P62987 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
UBA52P62987 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC4.95□□□□□ -1.62
UBA52P62987 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
UBA52P62987 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
UBA52P62987 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC4.95□□□□□ -1.62
UBA52P62987 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
UBA52P62987 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC4.95□□□□□ -1.62
UBA52P62987 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.95□□□□□ -1.62
UBA52P62987 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
UBA52P62987 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.95□□□□□ -1.62
UBA52P62987 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
UBA52P62987 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
UBA52P62987 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
UBA52P62987 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.95□□□□□ -1.62
UBA52P62987 RPL35AP31-201ENST00000418340 337 ntBASIC4.95□□□□□ -1.62
UBA52P62987 AL035660.1-201ENST00000422041 222 ntBASIC4.95□□□□□ -1.62
UBA52P62987 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.95□□□□□ -1.62
UBA52P62987 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.95□□□□□ -1.62
UBA52P62987 RPL36AP39-201ENST00000445859 318 ntBASIC4.95□□□□□ -1.62
UBA52P62987 MORF4-201ENST00000447135 971 ntBASIC4.95□□□□□ -1.62
UBA52P62987 AP006222.1-205ENST00000450734 457 ntBASIC4.95□□□□□ -1.62
UBA52P62987 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.95□□□□□ -1.62
UBA52P62987 RN7SL193P-201ENST00000491708 276 ntBASIC4.95□□□□□ -1.62
UBA52P62987 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC4.95□□□□□ -1.62
UBA52P62987 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
UBA52P62987 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.95□□□□□ -1.62
UBA52P62987 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.95□□□□□ -1.62
UBA52P62987 AC112191.2-201ENST00000522428 333 ntBASIC4.95□□□□□ -1.62
UBA52P62987 AC021269.1-201ENST00000526860 705 ntBASIC4.95□□□□□ -1.62
UBA52P62987 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.95□□□□□ -1.62
UBA52P62987 AP001858.2-201ENST00000536213 601 ntBASIC4.95□□□□□ -1.62
UBA52P62987 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.95□□□□□ -1.62
UBA52P62987 AC068993.1-201ENST00000546724 589 ntBASIC4.95□□□□□ -1.62
UBA52P62987 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC4.95□□□□□ -1.62
UBA52P62987 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
UBA52P62987 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
UBA52P62987 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.95□□□□□ -1.62
UBA52P62987 AC051619.2-201ENST00000559063 397 ntBASIC4.95□□□□□ -1.62
UBA52P62987 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC4.95□□□□□ -1.62
UBA52P62987 AC023389.2-201ENST00000580031 955 ntBASIC4.95□□□□□ -1.62
UBA52P62987 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
UBA52P62987 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
UBA52P62987 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
UBA52P62987 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC4.95□□□□□ -1.62
UBA52P62987 MIR6793-201ENST00000612376 63 ntBASIC4.95□□□□□ -1.62
UBA52P62987 AC022467.1-201ENST00000614738 749 ntBASIC4.95□□□□□ -1.62
UBA52P62987 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC4.95□□□□□ -1.62
UBA52P62987 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.95□□□□□ -1.62
UBA52P62987 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
UBA52P62987 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.95□□□□□ -1.62
UBA52P62987 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC4.95□□□□□ -1.62
UBA52P62987 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
UBA52P62987 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
UBA52P62987 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
UBA52P62987 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
UBA52P62987 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
UBA52P62987 AC008079.2-201ENST00000623543 20396 ntBASIC4.95□□□□□ -1.62
UBA52P62987 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
UBA52P62987 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UBA52P62987 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.94□□□□□ -1.62
UBA52P62987 RBMY1HP-201ENST00000382759 1389 ntBASIC4.94□□□□□ -1.62
UBA52P62987 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UBA52P62987 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UBA52P62987 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UBA52P62987 CRP-204ENST00000368112 787 ntTSL 2 BASIC4.94□□□□□ -1.62
UBA52P62987 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
UBA52P62987 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
UBA52P62987 PTCD2P2-201ENST00000415579 1095 ntBASIC4.94□□□□□ -1.62
UBA52P62987 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC4.94□□□□□ -1.62
UBA52P62987 GTF3AP1-201ENST00000416942 1004 ntBASIC4.94□□□□□ -1.62
UBA52P62987 HYALP1-201ENST00000417674 1279 ntBASIC4.94□□□□□ -1.62
UBA52P62987 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC4.94□□□□□ -1.62
UBA52P62987 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.94□□□□□ -1.62
UBA52P62987 NDUFS5P5-201ENST00000437256 321 ntBASIC4.94□□□□□ -1.62
UBA52P62987 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.94□□□□□ -1.62
UBA52P62987 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.94□□□□□ -1.62
UBA52P62987 FTLP8-201ENST00000446770 267 ntBASIC4.94□□□□□ -1.62
UBA52P62987 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
UBA52P62987 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.94□□□□□ -1.62
UBA52P62987 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.94□□□□□ -1.62
UBA52P62987 AL445665.1-202ENST00000452436 324 ntBASIC4.94□□□□□ -1.62
UBA52P62987 AC023141.9-201ENST00000458734 412 ntBASIC4.94□□□□□ -1.62
UBA52P62987 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC4.94□□□□□ -1.62
UBA52P62987 RPSAP37-201ENST00000470913 821 ntBASIC4.94□□□□□ -1.62
UBA52P62987 UBFD1P1-201ENST00000473259 814 ntBASIC4.94□□□□□ -1.62
UBA52P62987 AC092865.4-201ENST00000477936 615 ntBASIC4.94□□□□□ -1.62
UBA52P62987 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UBA52P62987 RPL23AP40-201ENST00000487630 390 ntBASIC4.94□□□□□ -1.62
UBA52P62987 AL136038.1-201ENST00000497246 351 ntBASIC4.94□□□□□ -1.62
UBA52P62987 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC4.94□□□□□ -1.62
UBA52P62987 SETP21-201ENST00000514799 892 ntBASIC4.94□□□□□ -1.62
UBA52P62987 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.94□□□□□ -1.62
UBA52P62987 RNU6-513P-201ENST00000516104 104 ntBASIC4.94□□□□□ -1.62
UBA52P62987 RN7SKP288-201ENST00000516227 268 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms