Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 GAPDHP59-201ENST00000435908 267 ntBASIC3.82□□□□□ -1.8
RPL39P62891 AC006335.2-201ENST00000437993 330 ntBASIC3.82□□□□□ -1.8
RPL39P62891 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC3.82□□□□□ -1.8
RPL39P62891 AC012512.1-201ENST00000446594 718 ntBASIC3.82□□□□□ -1.8
RPL39P62891 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC3.82□□□□□ -1.8
RPL39P62891 AL122020.1-201ENST00000472287 459 ntBASIC3.82□□□□□ -1.8
RPL39P62891 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RPL39P62891 AC093827.1-201ENST00000480094 861 ntBASIC3.82□□□□□ -1.8
RPL39P62891 CREM-238ENST00000488741 651 ntTSL 2 BASIC3.82□□□□□ -1.8
RPL39P62891 RPS12P31-201ENST00000491419 398 ntBASIC3.82□□□□□ -1.8
RPL39P62891 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC3.82□□□□□ -1.8
RPL39P62891 NIFKP7-201ENST00000503365 834 ntBASIC3.82□□□□□ -1.8
RPL39P62891 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC3.82□□□□□ -1.8
RPL39P62891 USP9YP2-201ENST00000504503 1000 ntBASIC3.82□□□□□ -1.8
RPL39P62891 USP9YP1-201ENST00000513521 1002 ntBASIC3.82□□□□□ -1.8
RPL39P62891 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC3.82□□□□□ -1.8
RPL39P62891 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC3.82□□□□□ -1.8
RPL39P62891 AP003396.4-201ENST00000527574 265 ntBASIC3.82□□□□□ -1.8
RPL39P62891 HMGN2P36-201ENST00000529541 409 ntBASIC3.82□□□□□ -1.8
RPL39P62891 AC084121.1-201ENST00000533882 835 ntBASIC3.82□□□□□ -1.8
RPL39P62891 OLR1-209ENST00000543993 822 ntTSL 2 BASIC3.82□□□□□ -1.8
RPL39P62891 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC3.82□□□□□ -1.8
RPL39P62891 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC3.82□□□□□ -1.8
RPL39P62891 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC3.82□□□□□ -1.8
RPL39P62891 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC3.82□□□□□ -1.8
RPL39P62891 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC3.82□□□□□ -1.8
RPL39P62891 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC3.82□□□□□ -1.8
RPL39P62891 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC3.82□□□□□ -1.8
RPL39P62891 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC3.82□□□□□ -1.8
RPL39P62891 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC3.82□□□□□ -1.8
RPL39P62891 OR51C1P-201ENST00000608504 942 ntBASIC3.82□□□□□ -1.8
RPL39P62891 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC3.82□□□□□ -1.8
RPL39P62891 AC244107.2-201ENST00000611773 76 ntBASIC3.82□□□□□ -1.8
RPL39P62891 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC3.82□□□□□ -1.8
RPL39P62891 AC099654.6-201ENST00000636487 512 ntBASIC3.82□□□□□ -1.8
RPL39P62891 AC007603.3-201ENST00000636915 979 ntBASIC3.82□□□□□ -1.8
RPL39P62891 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC3.82□□□□□ -1.8
RPL39P62891 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC3.82□□□□□ -1.8
RPL39P62891 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RPL39P62891 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RPL39P62891 AL353796.1-201ENST00000561542 3241 ntBASIC3.82□□□□□ -1.8
RPL39P62891 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC3.82□□□□□ -1.8
RPL39P62891 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RPL39P62891 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RPL39P62891 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RPL39P62891 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RPL39P62891 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RPL39P62891 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
RPL39P62891 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RPL39P62891 AC010266.2-201ENST00000564741 3255 ntBASIC3.82□□□□□ -1.8
RPL39P62891 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RPL39P62891 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC3.81□□□□□ -1.8
RPL39P62891 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC3.81□□□□□ -1.8
RPL39P62891 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
RPL39P62891 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RPL39P62891 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RPL39P62891 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RPL39P62891 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RPL39P62891 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC3.81□□□□□ -1.8
RPL39P62891 PKIB-203ENST00000368446 556 ntTSL 2 BASIC3.81□□□□□ -1.8
RPL39P62891 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC3.81□□□□□ -1.8
RPL39P62891 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC3.81□□□□□ -1.8
RPL39P62891 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC3.81□□□□□ -1.8
RPL39P62891 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RPL39P62891 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC3.81□□□□□ -1.8
RPL39P62891 GCNT1P4-201ENST00000404096 329 ntBASIC3.81□□□□□ -1.8
RPL39P62891 RN7SKP38-201ENST00000410782 309 ntBASIC3.81□□□□□ -1.8
RPL39P62891 PCNPP4-201ENST00000414817 517 ntBASIC3.81□□□□□ -1.8
RPL39P62891 AL121878.1-201ENST00000418638 859 ntBASIC3.81□□□□□ -1.8
RPL39P62891 BX284632.2-201ENST00000421091 399 ntBASIC3.81□□□□□ -1.8
RPL39P62891 RPSAP32-201ENST00000432681 526 ntBASIC3.81□□□□□ -1.8
RPL39P62891 UBQLN1P1-207ENST00000441056 1169 ntBASIC3.81□□□□□ -1.8
RPL39P62891 AL512605.1-202ENST00000441919 381 ntBASIC3.81□□□□□ -1.8
RPL39P62891 RPL6P30-201ENST00000443382 862 ntBASIC3.81□□□□□ -1.8
RPL39P62891 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC3.81□□□□□ -1.8
RPL39P62891 AL359955.2-201ENST00000445380 353 ntBASIC3.81□□□□□ -1.8
RPL39P62891 RBMY2AP-201ENST00000445405 1157 ntBASIC3.81□□□□□ -1.8
RPL39P62891 AC097463.1-201ENST00000447288 481 ntBASIC3.81□□□□□ -1.8
RPL39P62891 RBMY2CP-201ENST00000448575 1157 ntBASIC3.81□□□□□ -1.8
RPL39P62891 RBMY2DP-202ENST00000448881 1157 ntBASIC3.81□□□□□ -1.8
RPL39P62891 AL450023.1-201ENST00000450868 751 ntBASIC3.81□□□□□ -1.8
RPL39P62891 RBMY2BP-202ENST00000451071 1156 ntBASIC3.81□□□□□ -1.8
RPL39P62891 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC3.81□□□□□ -1.8
RPL39P62891 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC3.81□□□□□ -1.8
RPL39P62891 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC3.81□□□□□ -1.8
RPL39P62891 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC3.81□□□□□ -1.8
RPL39P62891 GUSBP9-201ENST00000510138 584 ntBASIC3.81□□□□□ -1.8
RPL39P62891 SCARNA18.1-201ENST00000516330 83 ntBASIC3.81□□□□□ -1.8
RPL39P62891 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC3.81□□□□□ -1.8
RPL39P62891 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC3.81□□□□□ -1.8
RPL39P62891 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC3.81□□□□□ -1.8
RPL39P62891 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC3.81□□□□□ -1.8
RPL39P62891 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC3.81□□□□□ -1.8
RPL39P62891 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC3.81□□□□□ -1.8
RPL39P62891 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC3.81□□□□□ -1.8
RPL39P62891 AC006349.1-201ENST00000555526 235 ntBASIC3.81□□□□□ -1.8
RPL39P62891 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC3.81□□□□□ -1.8
RPL39P62891 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC3.81□□□□□ -1.8
RPL39P62891 MT1CP-201ENST00000567054 174 ntBASIC3.81□□□□□ -1.8
RPL39P62891 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms