Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CKS1BP61024 MIR6503-201ENST00000622884 86 ntBASIC4.03□□□□□ -1.76
CKS1BP61024 SNX18P12-201ENST00000624821 759 ntBASIC4.03□□□□□ -1.76
CKS1BP61024 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.03□□□□□ -1.76
CKS1BP61024 DRG1-207ENST00000629688 309 ntTSL 5 BASIC4.03□□□□□ -1.76
CKS1BP61024 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CKS1BP61024 CASC19-222ENST00000641321 1173 ntBASIC4.03□□□□□ -1.76
CKS1BP61024 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.03□□□□□ -1.76
CKS1BP61024 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CKS1BP61024 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CKS1BP61024 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.03□□□□□ -1.76
CKS1BP61024 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CKS1BP61024 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CKS1BP61024 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CKS1BP61024 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.03□□□□□ -1.77
CKS1BP61024 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.02□□□□□ -1.77
CKS1BP61024 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
CKS1BP61024 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.02□□□□□ -1.77
CKS1BP61024 AP001273.1-201ENST00000624493 3152 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CKS1BP61024 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC4.02□□□□□ -1.77
CKS1BP61024 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CKS1BP61024 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CKS1BP61024 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CKS1BP61024 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CKS1BP61024 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CKS1BP61024 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CKS1BP61024 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CKS1BP61024 RNA5SP346-201ENST00000363541 121 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC4.02□□□□□ -1.77
CKS1BP61024 PTCD2P2-201ENST00000415579 1095 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 RPL21P50-201ENST00000417698 477 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 MYB-206ENST00000420123 1051 ntTSL 5 BASIC4.02□□□□□ -1.77
CKS1BP61024 RPL12P12-201ENST00000424633 501 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 IPMKP1-201ENST00000425988 855 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC4.02□□□□□ -1.77
CKS1BP61024 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC4.02□□□□□ -1.77
CKS1BP61024 AC112492.2-201ENST00000432774 1030 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CKS1BP61024 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CKS1BP61024 AL645936.1-201ENST00000441979 518 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 AL158214.1-201ENST00000444423 404 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 HIGD1AP16-201ENST00000450986 258 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 AC073648.3-201ENST00000504939 925 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.02□□□□□ -1.77
CKS1BP61024 TOMM22P4-201ENST00000511318 336 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 AC134698.1-201ENST00000511619 643 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 NDUFB4P12-201ENST00000513465 390 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.02□□□□□ -1.77
CKS1BP61024 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC4.02□□□□□ -1.77
CKS1BP61024 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC4.02□□□□□ -1.77
CKS1BP61024 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.02□□□□□ -1.77
CKS1BP61024 NPIPB14P-203ENST00000532298 987 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 OR9G2P-201ENST00000533326 880 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 AC084824.2-201ENST00000548906 345 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC4.02□□□□□ -1.77
CKS1BP61024 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC4.02□□□□□ -1.77
CKS1BP61024 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC4.02□□□□□ -1.77
CKS1BP61024 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.02□□□□□ -1.77
CKS1BP61024 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC4.02□□□□□ -1.77
CKS1BP61024 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC4.02□□□□□ -1.77
CKS1BP61024 RN7SL52P-201ENST00000584271 284 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 OR7E19P-202ENST00000589942 844 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 AL031429.2-201ENST00000602605 649 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 AL390877.1-201ENST00000605704 214 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC4.02□□□□□ -1.77
CKS1BP61024 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 RN7SL787P-201ENST00000613000 284 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 AL158196.1-201ENST00000616786 434 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 RN7SL544P-201ENST00000617232 284 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 AC022106.2-201ENST00000620114 757 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CKS1BP61024 RN7SL763P-201ENST00000620922 284 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 AL023881.1-201ENST00000621088 301 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 OXSM-209ENST00000626005 309 ntTSL 3 BASIC4.02□□□□□ -1.77
CKS1BP61024 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC4.02□□□□□ -1.77
CKS1BP61024 BMS1P21-201ENST00000634565 365 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
CKS1BP61024 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CKS1BP61024 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.02□□□□□ -1.77
CKS1BP61024 AC018529.3-201ENST00000624212 2254 ntBASIC4.02□□□□□ -1.77
CKS1BP61024 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CKS1BP61024 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.02□□□□□ -1.77
CKS1BP61024 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.02□□□□□ -1.77
CKS1BP61024 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CKS1BP61024 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CKS1BP61024 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.01□□□□□ -1.77
CKS1BP61024 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
CKS1BP61024 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CKS1BP61024 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CKS1BP61024 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CKS1BP61024 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CKS1BP61024 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CKS1BP61024 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CKS1BP61024 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CKS1BP61024 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CKS1BP61024 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CKS1BP61024 RNU6-984P-201ENST00000363236 109 ntBASIC4.01□□□□□ -1.77
CKS1BP61024 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms