Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC023512.1-201ENST00000444513 499 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.79□□□□□ -1.48
CLRN1P58418 CASP3P1-201ENST00000446037 609 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLRN1P58418 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.79□□□□□ -1.48
CLRN1P58418 AC236972.4-201ENST00000458091 963 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.79□□□□□ -1.48
CLRN1P58418 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.79□□□□□ -1.48
CLRN1P58418 AC092824.1-201ENST00000483524 576 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 RPL5P33-201ENST00000487833 905 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 AC009567.2-201ENST00000502989 349 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 PSMA2P2-201ENST00000504319 686 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.79□□□□□ -1.48
CLRN1P58418 Y_RNA.655-201ENST00000515919 96 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 AC010306.1-201ENST00000523223 1117 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLRN1P58418 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CLRN1P58418 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.79□□□□□ -1.48
CLRN1P58418 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.79□□□□□ -1.48
CLRN1P58418 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.79□□□□□ -1.48
CLRN1P58418 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.79□□□□□ -1.48
CLRN1P58418 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.79□□□□□ -1.48
CLRN1P58418 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.79□□□□□ -1.48
CLRN1P58418 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.79□□□□□ -1.48
CLRN1P58418 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.79□□□□□ -1.48
CLRN1P58418 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.79□□□□□ -1.48
CLRN1P58418 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.79□□□□□ -1.48
CLRN1P58418 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.79□□□□□ -1.48
CLRN1P58418 RN7SL32P-201ENST00000580514 281 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.79□□□□□ -1.48
CLRN1P58418 RPL7AP69-201ENST00000595306 806 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 AC011497.2-201ENST00000600255 639 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 AC012065.3-201ENST00000602736 439 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 AC018638.7-201ENST00000605836 1114 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.79□□□□□ -1.48
CLRN1P58418 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.79□□□□□ -1.48
CLRN1P58418 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.79□□□□□ -1.48
CLRN1P58418 AC009237.15-201ENST00000610252 501 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.79□□□□□ -1.48
CLRN1P58418 MIR6070-201ENST00000613967 103 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.79□□□□□ -1.48
CLRN1P58418 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.79□□□□□ -1.48
CLRN1P58418 MIR1322-201ENST00000638013 71 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC5.79□□□□□ -1.48
CLRN1P58418 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLRN1P58418 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLRN1P58418 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLRN1P58418 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CLRN1P58418 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC5.78□□□□□ -1.48
CLRN1P58418 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CLRN1P58418 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CLRN1P58418 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLRN1P58418 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLRN1P58418 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.78□□□□□ -1.48
CLRN1P58418 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLRN1P58418 AC007406.5-201ENST00000570140 3170 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.78□□□□□ -1.48
CLRN1P58418 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.78□□□□□ -1.48
CLRN1P58418 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLRN1P58418 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLRN1P58418 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.78□□□□□ -1.48
CLRN1P58418 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLRN1P58418 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.78□□□□□ -1.48
CLRN1P58418 AC092634.1-201ENST00000366505 199 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CLRN1P58418 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLRN1P58418 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLRN1P58418 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.78□□□□□ -1.48
CLRN1P58418 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLRN1P58418 SNORA7A-201ENST00000384765 139 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CLRN1P58418 SNORD65C-201ENST00000390962 71 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 AL591135.1-201ENST00000401578 5914 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 MTCO1P56-201ENST00000401674 224 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 RNA5SP155-201ENST00000411154 129 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 UBTFL2-201ENST00000411859 1191 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.78□□□□□ -1.48
CLRN1P58418 QRSL1P2-201ENST00000418582 964 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 RPL36P18-201ENST00000419316 318 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 RPA2P2-201ENST00000419698 796 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 HIGD1AP12-201ENST00000427832 281 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC5.78□□□□□ -1.48
CLRN1P58418 AC096638.2-201ENST00000434965 711 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 AL138787.1-202ENST00000437804 898 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 VN1R110P-201ENST00000438988 971 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 ATP5C1P1-201ENST00000441945 895 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.78□□□□□ -1.48
CLRN1P58418 MRPL35P4-201ENST00000453682 566 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 CCNJP2-201ENST00000457810 1163 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.78□□□□□ -1.48
CLRN1P58418 RPL5P12-201ENST00000477071 851 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.78□□□□□ -1.48
CLRN1P58418 RPL5P14-201ENST00000494197 878 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 AC122714.1-201ENST00000502510 459 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 SETP21-201ENST00000514799 892 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.78□□□□□ -1.48
CLRN1P58418 SCARNA5-201ENST00000516201 276 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 MTCYBP19-201ENST00000517463 1124 ntBASIC5.78□□□□□ -1.48
CLRN1P58418 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.78□□□□□ -1.48
CLRN1P58418 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms