Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDH12P55289 MTND1P8-201ENST00000571424 950 ntBASIC5.49□□□□□ -1.53
CDH12P55289 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDH12P55289 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH12P55289 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH12P55289 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH12P55289 MTATP6P2-201ENST00000603319 678 ntBASIC5.49□□□□□ -1.53
CDH12P55289 AC004775.1-201ENST00000607389 753 ntBASIC5.49□□□□□ -1.53
CDH12P55289 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH12P55289 AL080312.2-201ENST00000613001 630 ntBASIC5.49□□□□□ -1.53
CDH12P55289 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH12P55289 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH12P55289 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH12P55289 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.49□□□□□ -1.53
CDH12P55289 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH12P55289 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH12P55289 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH12P55289 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH12P55289 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.49□□□□□ -1.53
CDH12P55289 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.49□□□□□ -1.53
CDH12P55289 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CDH12P55289 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH12P55289 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDH12P55289 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
CDH12P55289 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH12P55289 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH12P55289 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH12P55289 SAMM50P1-201ENST00000455403 1399 ntBASIC5.48□□□□□ -1.53
CDH12P55289 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH12P55289 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH12P55289 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH12P55289 SNORA21-201ENST00000362423 132 ntBASIC5.48□□□□□ -1.53
CDH12P55289 RNA5SP453-201ENST00000362503 119 ntBASIC5.48□□□□□ -1.53
CDH12P55289 RNA5SP211-201ENST00000365516 117 ntBASIC5.48□□□□□ -1.53
CDH12P55289 RNU6-650P-201ENST00000365658 111 ntBASIC5.48□□□□□ -1.53
CDH12P55289 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH12P55289 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CDH12P55289 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH12P55289 AL132875.1-201ENST00000403623 949 ntBASIC5.48□□□□□ -1.53
CDH12P55289 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH12P55289 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH12P55289 AC073310.1-201ENST00000423226 1033 ntBASIC5.48□□□□□ -1.53
CDH12P55289 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH12P55289 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH12P55289 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH12P55289 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH12P55289 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH12P55289 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH12P55289 AC002553.3-201ENST00000453002 341 ntBASIC5.48□□□□□ -1.53
CDH12P55289 CLIC4P1-201ENST00000453177 535 ntBASIC5.48□□□□□ -1.53
CDH12P55289 MTATP6P14-201ENST00000455189 673 ntBASIC5.48□□□□□ -1.53
CDH12P55289 CEACAMP11-201ENST00000455211 583 ntBASIC5.48□□□□□ -1.53
CDH12P55289 Z83838.1-202ENST00000456225 839 ntBASIC5.48□□□□□ -1.53
CDH12P55289 AC104164.1-201ENST00000460282 590 ntBASIC5.48□□□□□ -1.53
CDH12P55289 OR7E22P-201ENST00000478335 1035 ntBASIC5.48□□□□□ -1.53
CDH12P55289 RPL38P3-201ENST00000484463 213 ntBASIC5.48□□□□□ -1.53
CDH12P55289 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH12P55289 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH12P55289 CR383658.1-201ENST00000514609 734 ntBASIC5.48□□□□□ -1.53
CDH12P55289 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
CDH12P55289 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.48□□□□□ -1.53
CDH12P55289 OR8Q1P-201ENST00000526467 655 ntBASIC5.48□□□□□ -1.53
CDH12P55289 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH12P55289 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH12P55289 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH12P55289 AC126615.2-201ENST00000553003 515 ntBASIC5.48□□□□□ -1.53
CDH12P55289 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.48□□□□□ -1.53
CDH12P55289 MT1CP-201ENST00000567054 174 ntBASIC5.48□□□□□ -1.53
CDH12P55289 SMIM12P1-201ENST00000603004 274 ntBASIC5.48□□□□□ -1.53
CDH12P55289 AL645933.2-201ENST00000606743 1207 ntBASIC5.48□□□□□ -1.53
CDH12P55289 AL135999.3-201ENST00000610501 812 ntBASIC5.48□□□□□ -1.53
CDH12P55289 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH12P55289 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH12P55289 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH12P55289 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CDH12P55289 AC006600.2-201ENST00000624834 2506 ntBASIC5.48□□□□□ -1.53
CDH12P55289 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CDH12P55289 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CDH12P55289 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH12P55289 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
CDH12P55289 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH12P55289 AL158152.1-201ENST00000602652 1435 ntBASIC5.48□□□□□ -1.53
CDH12P55289 AC092451.3-201ENST00000625067 1343 ntBASIC5.48□□□□□ -1.53
CDH12P55289 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CDH12P55289 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH12P55289 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH12P55289 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH12P55289 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
CDH12P55289 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH12P55289 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH12P55289 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CDH12P55289 RNU6-792P-201ENST00000363490 107 ntBASIC5.47□□□□□ -1.53
CDH12P55289 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH12P55289 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH12P55289 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH12P55289 AC069282.1-201ENST00000411911 526 ntBASIC5.47□□□□□ -1.53
CDH12P55289 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH12P55289 Z82198.3-201ENST00000421145 199 ntBASIC5.47□□□□□ -1.53
CDH12P55289 RPL7AP51-201ENST00000422016 760 ntBASIC5.47□□□□□ -1.53
CDH12P55289 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms