Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC009120.2-204ENST00000621548 2032 ntBASIC7.48□□□□□ -1.21
USP11P51784 AC016251.2-201ENST00000623393 3089 ntBASIC7.48□□□□□ -1.21
USP11P51784 AC099654.10-201ENST00000640395 161 ntBASIC7.48□□□□□ -1.21
USP11P51784 ZNF663P-202ENST00000641770 1131 ntBASIC7.48□□□□□ -1.21
USP11P51784 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
USP11P51784 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
USP11P51784 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.48□□□□□ -1.21
USP11P51784 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
USP11P51784 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
USP11P51784 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.48□□□□□ -1.21
USP11P51784 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.48□□□□□ -1.21
USP11P51784 AC008432.1-201ENST00000615912 1320 ntBASIC7.48□□□□□ -1.21
USP11P51784 AC062022.1-201ENST00000451026 1684 ntBASIC7.47□□□□□ -1.21
USP11P51784 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.47□□□□□ -1.21
USP11P51784 API5P1-201ENST00000424316 1510 ntBASIC7.47□□□□□ -1.21
USP11P51784 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
USP11P51784 MTND4P29-201ENST00000503122 1372 ntBASIC7.47□□□□□ -1.21
USP11P51784 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.47□□□□□ -1.21
USP11P51784 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USP11P51784 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USP11P51784 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.47□□□□□ -1.21
USP11P51784 AL139384.2-201ENST00000613809 3590 ntBASIC7.47□□□□□ -1.21
USP11P51784 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.47□□□□□ -1.21
USP11P51784 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.47□□□□□ -1.21
USP11P51784 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
USP11P51784 RN7SKP184-201ENST00000362348 333 ntBASIC7.47□□□□□ -1.21
USP11P51784 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
USP11P51784 OR13C3-201ENST00000374781 1108 ntBASIC7.47□□□□□ -1.21
USP11P51784 FCF1P9-201ENST00000412546 282 ntBASIC7.47□□□□□ -1.21
USP11P51784 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.47□□□□□ -1.21
USP11P51784 MRPS21P5-201ENST00000417885 231 ntBASIC7.47□□□□□ -1.21
USP11P51784 OR6C64P-201ENST00000419708 825 ntBASIC7.47□□□□□ -1.21
USP11P51784 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.47□□□□□ -1.21
USP11P51784 CYCSP52-201ENST00000422857 310 ntBASIC7.47□□□□□ -1.21
USP11P51784 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.47□□□□□ -1.21
USP11P51784 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC7.47□□□□□ -1.21
USP11P51784 Z68868.1-201ENST00000429048 544 ntBASIC7.47□□□□□ -1.21
USP11P51784 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC7.47□□□□□ -1.21
USP11P51784 AC129850.1-201ENST00000436203 508 ntBASIC7.47□□□□□ -1.21
USP11P51784 EEF1A1P39-201ENST00000440791 250 ntBASIC7.47□□□□□ -1.21
USP11P51784 PMS2P9-201ENST00000441237 515 ntBASIC7.47□□□□□ -1.21
USP11P51784 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
USP11P51784 AL671855.1-201ENST00000446875 1203 ntBASIC7.47□□□□□ -1.21
USP11P51784 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
USP11P51784 AC097262.1-201ENST00000452559 548 ntBASIC7.47□□□□□ -1.21
USP11P51784 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC7.47□□□□□ -1.21
USP11P51784 AC236972.4-201ENST00000458091 963 ntBASIC7.47□□□□□ -1.21
USP11P51784 RPL7P40-201ENST00000481703 745 ntBASIC7.47□□□□□ -1.21
USP11P51784 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
USP11P51784 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC7.47□□□□□ -1.21
USP11P51784 AC015524.1-201ENST00000491585 472 ntBASIC7.47□□□□□ -1.21
USP11P51784 TPT1P3-201ENST00000492841 512 ntBASIC7.47□□□□□ -1.21
USP11P51784 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
USP11P51784 RPL19P11-201ENST00000495944 589 ntBASIC7.47□□□□□ -1.21
USP11P51784 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC7.47□□□□□ -1.21
USP11P51784 RNU6-232P-201ENST00000517144 64 ntBASIC7.47□□□□□ -1.21
USP11P51784 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC7.47□□□□□ -1.21
USP11P51784 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC7.47□□□□□ -1.21
USP11P51784 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC7.47□□□□□ -1.21
USP11P51784 AP000619.2-201ENST00000546014 969 ntBASIC7.47□□□□□ -1.21
USP11P51784 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.47□□□□□ -1.21
USP11P51784 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC7.47□□□□□ -1.21
USP11P51784 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.47□□□□□ -1.21
USP11P51784 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC7.47□□□□□ -1.21
USP11P51784 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC7.47□□□□□ -1.21
USP11P51784 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC7.47□□□□□ -1.21
USP11P51784 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC7.47□□□□□ -1.21
USP11P51784 AP005205.1-201ENST00000563503 508 ntBASIC7.47□□□□□ -1.21
USP11P51784 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.47□□□□□ -1.21
USP11P51784 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC7.47□□□□□ -1.21
USP11P51784 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC7.47□□□□□ -1.21
USP11P51784 AC022069.1-201ENST00000582910 658 ntBASIC7.47□□□□□ -1.21
USP11P51784 CBX3P2-202ENST00000583365 535 ntBASIC7.47□□□□□ -1.21
USP11P51784 MIR212-201ENST00000586026 110 ntBASIC7.47□□□□□ -1.21
USP11P51784 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC7.47□□□□□ -1.21
USP11P51784 AL157899.1-201ENST00000604110 936 ntBASIC7.47□□□□□ -1.21
USP11P51784 AL163642.2-201ENST00000604722 1019 ntBASIC7.47□□□□□ -1.21
USP11P51784 AC068726.1-201ENST00000610993 341 ntBASIC7.47□□□□□ -1.21
USP11P51784 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC7.47□□□□□ -1.21
USP11P51784 AC073114.1-201ENST00000612027 490 ntBASIC7.47□□□□□ -1.21
USP11P51784 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC7.47□□□□□ -1.21
USP11P51784 U1.41-201ENST00000617626 165 ntBASIC7.47□□□□□ -1.21
USP11P51784 AP001264.1-201ENST00000620602 703 ntBASIC7.47□□□□□ -1.21
USP11P51784 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC7.47□□□□□ -1.21
USP11P51784 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC7.47□□□□□ -1.21
USP11P51784 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
USP11P51784 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
USP11P51784 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.47□□□□□ -1.21
USP11P51784 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USP11P51784 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.47□□□□□ -1.21
USP11P51784 CASC19-228ENST00000641414 1684 ntBASIC7.47□□□□□ -1.21
USP11P51784 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
USP11P51784 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
USP11P51784 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USP11P51784 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
USP11P51784 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
USP11P51784 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
USP11P51784 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.46□□□□□ -1.21
USP11P51784 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.46□□□□□ -1.21
USP11P51784 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms