Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AL121594.2-201ENST00000541658 472 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 AC087888.1-201ENST00000550884 1254 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC4.85□□□□□ -1.63
NKX2-1P43699 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.85□□□□□ -1.63
NKX2-1P43699 OR4C49P-201ENST00000563891 900 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 LINC00556-201ENST00000569603 412 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.85□□□□□ -1.63
NKX2-1P43699 AC068020.1-201ENST00000594215 661 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 DNAJC19P3-201ENST00000594491 331 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC4.85□□□□□ -1.63
NKX2-1P43699 AC130352.1-201ENST00000602979 661 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 PPATP2-201ENST00000605635 508 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC4.85□□□□□ -1.63
NKX2-1P43699 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC4.85□□□□□ -1.63
NKX2-1P43699 AL589743.6-201ENST00000611025 117 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 AC022106.1-201ENST00000612834 766 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC4.85□□□□□ -1.63
NKX2-1P43699 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC4.85□□□□□ -1.63
NKX2-1P43699 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.85□□□□□ -1.63
NKX2-1P43699 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-1P43699 FO681491.1-202ENST00000623392 737 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.85□□□□□ -1.63
NKX2-1P43699 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.85□□□□□ -1.63
NKX2-1P43699 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC4.85□□□□□ -1.63
NKX2-1P43699 ATM-229ENST00000639953 587 ntTSL 5 BASIC4.85□□□□□ -1.63
NKX2-1P43699 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
NKX2-1P43699 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
NKX2-1P43699 AC009501.3-201ENST00000605001 1352 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-1P43699 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-1P43699 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.85□□□□□ -1.63
NKX2-1P43699 MTCO1P7-201ENST00000419523 1542 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 MT-RNR2-201ENST00000387347 1559 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.85□□□□□ -1.63
NKX2-1P43699 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-1P43699 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.85□□□□□ -1.63
NKX2-1P43699 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-1P43699 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.85□□□□□ -1.63
NKX2-1P43699 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-1P43699 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-1P43699 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-1P43699 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-1P43699 AC020633.1-201ENST00000468439 2247 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-1P43699 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-1P43699 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.84□□□□□ -1.63
NKX2-1P43699 AL133243.2-201ENST00000610331 1621 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-1P43699 CAP1P2-201ENST00000417455 1409 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-1P43699 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-1P43699 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.84□□□□□ -1.63
NKX2-1P43699 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC4.84□□□□□ -1.63
NKX2-1P43699 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-1P43699 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-1P43699 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-1P43699 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-1P43699 AC092634.1-201ENST00000366505 199 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-1P43699 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.84□□□□□ -1.63
NKX2-1P43699 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-1P43699 AC104297.1-201ENST00000393779 870 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-1P43699 AL356057.1-202ENST00000402263 756 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 RNA5SP155-201ENST00000411154 129 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC4.84□□□□□ -1.63
NKX2-1P43699 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC4.84□□□□□ -1.63
NKX2-1P43699 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-1P43699 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.84□□□□□ -1.63
NKX2-1P43699 AC112492.2-201ENST00000432774 1030 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 AC242426.1-201ENST00000435270 960 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC4.84□□□□□ -1.63
NKX2-1P43699 AC096632.2-201ENST00000438139 1239 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.84□□□□□ -1.63
NKX2-1P43699 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC4.84□□□□□ -1.63
NKX2-1P43699 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC4.84□□□□□ -1.63
NKX2-1P43699 MED28P3-201ENST00000444288 531 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 AL512593.1-201ENST00000444758 779 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 AC006326.1-201ENST00000445465 787 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 AL157827.1-201ENST00000447622 132 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-1P43699 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC4.84□□□□□ -1.63
NKX2-1P43699 SDC4P-201ENST00000453285 601 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 RPL31P11-202ENST00000454082 372 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC4.84□□□□□ -1.63
NKX2-1P43699 PFN1P6-201ENST00000476786 399 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 AC020779.1-201ENST00000478757 796 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.84□□□□□ -1.63
NKX2-1P43699 RN7SL413P-201ENST00000482700 297 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 AC104629.1-201ENST00000494226 508 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 SUMO1P1-201ENST00000497904 306 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 AC009567.2-201ENST00000502989 349 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 NREP-217ENST00000509025 987 ntTSL 3 BASIC4.84□□□□□ -1.63
NKX2-1P43699 AC108120.2-201ENST00000512973 294 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.84□□□□□ -1.63
NKX2-1P43699 NREP-223ENST00000515855 801 ntTSL 4 BASIC4.84□□□□□ -1.63
NKX2-1P43699 AC103833.1-201ENST00000517442 172 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 MTCYBP19-201ENST00000517463 1124 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms