Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSR1P43307 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SSR1P43307 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
SSR1P43307 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSR1P43307 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.14□□□□□ -1.43
SSR1P43307 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.13□□□□□ -1.43
SSR1P43307 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SSR1P43307 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSR1P43307 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.13□□□□□ -1.43
SSR1P43307 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSR1P43307 RPL11P3-201ENST00000395256 523 ntBASIC6.13□□□□□ -1.43
SSR1P43307 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.13□□□□□ -1.43
SSR1P43307 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.13□□□□□ -1.43
SSR1P43307 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.13□□□□□ -1.43
SSR1P43307 KRT8P51-201ENST00000438938 274 ntBASIC6.13□□□□□ -1.43
SSR1P43307 FRG2FP-204ENST00000453982 852 ntBASIC6.13□□□□□ -1.43
SSR1P43307 AC104339.1-201ENST00000465478 348 ntBASIC6.13□□□□□ -1.43
SSR1P43307 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.13□□□□□ -1.43
SSR1P43307 EIF3LP3-201ENST00000495197 822 ntBASIC6.13□□□□□ -1.43
SSR1P43307 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.13□□□□□ -1.43
SSR1P43307 PRMT5P1-201ENST00000514351 598 ntBASIC6.13□□□□□ -1.43
SSR1P43307 WBP1LP3-201ENST00000523033 208 ntBASIC6.13□□□□□ -1.43
SSR1P43307 AP003396.4-201ENST00000527574 265 ntBASIC6.13□□□□□ -1.43
SSR1P43307 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.13□□□□□ -1.43
SSR1P43307 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.13□□□□□ -1.43
SSR1P43307 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.13□□□□□ -1.43
SSR1P43307 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
SSR1P43307 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.13□□□□□ -1.43
SSR1P43307 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.13□□□□□ -1.43
SSR1P43307 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSR1P43307 OR1E3-201ENST00000575608 948 ntBASIC6.13□□□□□ -1.43
SSR1P43307 MIR4660-201ENST00000583549 74 ntBASIC6.13□□□□□ -1.43
SSR1P43307 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SSR1P43307 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.13□□□□□ -1.43
SSR1P43307 AC060780.2-201ENST00000589047 198 ntBASIC6.13□□□□□ -1.43
SSR1P43307 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.13□□□□□ -1.43
SSR1P43307 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SSR1P43307 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.13□□□□□ -1.43
SSR1P43307 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.13□□□□□ -1.43
SSR1P43307 AC092266.1-201ENST00000610958 165 ntBASIC6.13□□□□□ -1.43
SSR1P43307 AL139099.4-201ENST00000614802 114 ntBASIC6.13□□□□□ -1.43
SSR1P43307 AL136228.1-201ENST00000622221 319 ntBASIC6.13□□□□□ -1.43
SSR1P43307 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.13□□□□□ -1.43
SSR1P43307 CASC19-274ENST00000642018 970 ntBASIC6.13□□□□□ -1.43
SSR1P43307 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.13□□□□□ -1.43
SSR1P43307 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSR1P43307 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSR1P43307 RBPJP2-201ENST00000618187 1444 ntBASIC6.13□□□□□ -1.43
SSR1P43307 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
SSR1P43307 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SSR1P43307 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.13□□□□□ -1.43
SSR1P43307 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
SSR1P43307 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.13□□□□□ -1.43
SSR1P43307 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSR1P43307 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSR1P43307 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SSR1P43307 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSR1P43307 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSR1P43307 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SSR1P43307 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.13□□□□□ -1.43
SSR1P43307 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.13□□□□□ -1.43
SSR1P43307 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SSR1P43307 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SSR1P43307 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SSR1P43307 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
SSR1P43307 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC6.12□□□□□ -1.43
SSR1P43307 MIR1275-201ENST00000408770 80 ntBASIC6.12□□□□□ -1.43
SSR1P43307 RPL35AP3-201ENST00000414680 288 ntBASIC6.12□□□□□ -1.43
SSR1P43307 METTL15P3-201ENST00000415522 1221 ntBASIC6.12□□□□□ -1.43
SSR1P43307 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.12□□□□□ -1.43
SSR1P43307 DEFA9P-201ENST00000433042 285 ntBASIC6.12□□□□□ -1.43
SSR1P43307 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SSR1P43307 TUBB4BP6-201ENST00000437576 479 ntBASIC6.12□□□□□ -1.43
SSR1P43307 AC096775.1-201ENST00000437724 448 ntBASIC6.12□□□□□ -1.43
SSR1P43307 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.12□□□□□ -1.43
SSR1P43307 AC097463.1-201ENST00000447288 481 ntBASIC6.12□□□□□ -1.43
SSR1P43307 AC005077.1-201ENST00000449226 375 ntBASIC6.12□□□□□ -1.43
SSR1P43307 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SSR1P43307 MEMO1P4-201ENST00000453590 386 ntBASIC6.12□□□□□ -1.43
SSR1P43307 AC099521.1-201ENST00000482557 334 ntBASIC6.12□□□□□ -1.43
SSR1P43307 AC092349.1-201ENST00000504903 310 ntBASIC6.12□□□□□ -1.43
SSR1P43307 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.12□□□□□ -1.43
SSR1P43307 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.12□□□□□ -1.43
SSR1P43307 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.12□□□□□ -1.43
SSR1P43307 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.12□□□□□ -1.43
SSR1P43307 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.12□□□□□ -1.43
SSR1P43307 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.12□□□□□ -1.43
SSR1P43307 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SSR1P43307 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.12□□□□□ -1.43
SSR1P43307 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SSR1P43307 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.12□□□□□ -1.43
SSR1P43307 AL034374.2-201ENST00000605281 548 ntBASIC6.12□□□□□ -1.43
SSR1P43307 AC145423.1-201ENST00000605712 336 ntBASIC6.12□□□□□ -1.43
SSR1P43307 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.12□□□□□ -1.43
SSR1P43307 AC245014.3-201ENST00000618589 347 ntBASIC6.12□□□□□ -1.43
SSR1P43307 AP001052.1-201ENST00000626421 99 ntBASIC6.12□□□□□ -1.43
SSR1P43307 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.12□□□□□ -1.43
SSR1P43307 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SSR1P43307 NEAT1-202ENST00000501122 22743 ntBASIC6.12□□□□□ -1.43
SSR1P43307 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms