Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SLC1A1P43005 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SLC1A1P43005 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SLC1A1P43005 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.84□□□□□ -1.47
SLC1A1P43005 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.84□□□□□ -1.47
SLC1A1P43005 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
SLC1A1P43005 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SLC1A1P43005 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
SLC1A1P43005 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.84□□□□□ -1.48
SLC1A1P43005 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
SLC1A1P43005 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
SLC1A1P43005 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SLC1A1P43005 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.83□□□□□ -1.48
SLC1A1P43005 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SLC1A1P43005 RN7SKP69-201ENST00000365390 305 ntBASIC5.83□□□□□ -1.48
SLC1A1P43005 RN7SKP81-201ENST00000365603 331 ntBASIC5.83□□□□□ -1.48
SLC1A1P43005 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.83□□□□□ -1.48
SLC1A1P43005 RPS3AP2-201ENST00000407190 754 ntBASIC5.83□□□□□ -1.48
SLC1A1P43005 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.83□□□□□ -1.48
SLC1A1P43005 AC006335.2-201ENST00000437993 330 ntBASIC5.83□□□□□ -1.48
SLC1A1P43005 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.83□□□□□ -1.48
SLC1A1P43005 CBX1P2-201ENST00000453841 458 ntBASIC5.83□□□□□ -1.48
SLC1A1P43005 AC005165.2-201ENST00000466070 380 ntBASIC5.83□□□□□ -1.48
SLC1A1P43005 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.83□□□□□ -1.48
SLC1A1P43005 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.83□□□□□ -1.48
SLC1A1P43005 ASNSP4-201ENST00000511103 447 ntBASIC5.83□□□□□ -1.48
SLC1A1P43005 AC060775.1-201ENST00000518241 520 ntBASIC5.83□□□□□ -1.48
SLC1A1P43005 AC020937.1-201ENST00000519677 1013 ntBASIC5.83□□□□□ -1.48
SLC1A1P43005 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.83□□□□□ -1.48
SLC1A1P43005 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.83□□□□□ -1.48
SLC1A1P43005 AC027216.1-201ENST00000577726 685 ntBASIC5.83□□□□□ -1.48
SLC1A1P43005 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.83□□□□□ -1.48
SLC1A1P43005 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.83□□□□□ -1.48
SLC1A1P43005 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.83□□□□□ -1.48
SLC1A1P43005 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.83□□□□□ -1.48
SLC1A1P43005 AL390318.1-201ENST00000624564 687 ntBASIC5.83□□□□□ -1.48
SLC1A1P43005 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SLC1A1P43005 MAPK10-338ENST00000641647 3362 ntBASIC5.83□□□□□ -1.48
SLC1A1P43005 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.83□□□□□ -1.48
SLC1A1P43005 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
SLC1A1P43005 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.83□□□□□ -1.48
SLC1A1P43005 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SLC1A1P43005 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SLC1A1P43005 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SLC1A1P43005 AP001029.2-203ENST00000589795 4910 ntBASIC5.83□□□□□ -1.48
SLC1A1P43005 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SLC1A1P43005 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.83□□□□□ -1.48
SLC1A1P43005 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
SLC1A1P43005 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
SLC1A1P43005 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SLC1A1P43005 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.83□□□□□ -1.48
SLC1A1P43005 AC097063.1-201ENST00000426714 1797 ntBASIC5.83□□□□□ -1.48
SLC1A1P43005 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SLC1A1P43005 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SLC1A1P43005 AL162456.1-201ENST00000634535 2006 ntBASIC5.82□□□□□ -1.48
SLC1A1P43005 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SLC1A1P43005 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SLC1A1P43005 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.82□□□□□ -1.48
SLC1A1P43005 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SLC1A1P43005 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
SLC1A1P43005 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.82□□□□□ -1.48
SLC1A1P43005 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.82□□□□□ -1.48
SLC1A1P43005 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.82□□□□□ -1.48
SLC1A1P43005 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.82□□□□□ -1.48
SLC1A1P43005 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.82□□□□□ -1.48
SLC1A1P43005 MRPS16P1-201ENST00000523462 412 ntBASIC5.82□□□□□ -1.48
SLC1A1P43005 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.82□□□□□ -1.48
SLC1A1P43005 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.82□□□□□ -1.48
SLC1A1P43005 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
SLC1A1P43005 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.82□□□□□ -1.48
SLC1A1P43005 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.82□□□□□ -1.48
SLC1A1P43005 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.82□□□□□ -1.48
SLC1A1P43005 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.82□□□□□ -1.48
SLC1A1P43005 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.82□□□□□ -1.48
SLC1A1P43005 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.82□□□□□ -1.48
SLC1A1P43005 MIR6889-201ENST00000613185 59 ntBASIC5.82□□□□□ -1.48
SLC1A1P43005 AC025574.2-201ENST00000615621 514 ntBASIC5.82□□□□□ -1.48
SLC1A1P43005 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.82□□□□□ -1.48
SLC1A1P43005 AC087565.3-203ENST00000641018 837 ntBASIC5.82□□□□□ -1.48
SLC1A1P43005 AL360270.2-201ENST00000562952 5985 ntBASIC5.82□□□□□ -1.48
SLC1A1P43005 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SLC1A1P43005 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SLC1A1P43005 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
SLC1A1P43005 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SLC1A1P43005 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.82□□□□□ -1.48
SLC1A1P43005 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SLC1A1P43005 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SLC1A1P43005 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SLC1A1P43005 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SLC1A1P43005 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
SLC1A1P43005 NEPNP-201ENST00000404786 1371 ntBASIC5.81□□□□□ -1.48
SLC1A1P43005 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SLC1A1P43005 AC144833.1-201ENST00000567953 4089 ntBASIC5.81□□□□□ -1.48
SLC1A1P43005 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SLC1A1P43005 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SLC1A1P43005 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SLC1A1P43005 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.81□□□□□ -1.48
SLC1A1P43005 RNA5SP131-201ENST00000365452 119 ntBASIC5.81□□□□□ -1.48
SLC1A1P43005 SNORD56.6-201ENST00000384569 71 ntBASIC5.81□□□□□ -1.48
SLC1A1P43005 PPIAP9-201ENST00000403866 498 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms