Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.16□□□□□ -1.42
MTHFRP42898 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.16□□□□□ -1.42
MTHFRP42898 UBE2V2P1-201ENST00000434717 398 ntBASIC6.16□□□□□ -1.42
MTHFRP42898 FMO7P-201ENST00000436045 768 ntBASIC6.16□□□□□ -1.42
MTHFRP42898 AC012075.1-201ENST00000436549 580 ntBASIC6.16□□□□□ -1.42
MTHFRP42898 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.16□□□□□ -1.42
MTHFRP42898 AL157385.1-201ENST00000446973 268 ntBASIC6.16□□□□□ -1.42
MTHFRP42898 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC6.16□□□□□ -1.42
MTHFRP42898 AC093166.4-201ENST00000457867 318 ntBASIC6.16□□□□□ -1.42
MTHFRP42898 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.16□□□□□ -1.42
MTHFRP42898 AL133372.1-201ENST00000493565 745 ntBASIC6.16□□□□□ -1.42
MTHFRP42898 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.16□□□□□ -1.42
MTHFRP42898 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
MTHFRP42898 RN7SKP67-201ENST00000515905 235 ntBASIC6.16□□□□□ -1.42
MTHFRP42898 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.16□□□□□ -1.42
MTHFRP42898 OR4A42P-201ENST00000531397 938 ntBASIC6.16□□□□□ -1.42
MTHFRP42898 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.16□□□□□ -1.42
MTHFRP42898 FKBP1AP1-201ENST00000594588 318 ntBASIC6.16□□□□□ -1.42
MTHFRP42898 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.16□□□□□ -1.42
MTHFRP42898 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.16□□□□□ -1.42
MTHFRP42898 MIR6837-201ENST00000620884 64 ntBASIC6.16□□□□□ -1.42
MTHFRP42898 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.16□□□□□ -1.42
MTHFRP42898 AC003992.1-201ENST00000635364 557 ntBASIC6.16□□□□□ -1.42
MTHFRP42898 CASC19-264ENST00000641912 1184 ntBASIC6.16□□□□□ -1.42
MTHFRP42898 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
MTHFRP42898 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.16□□□□□ -1.42
MTHFRP42898 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
MTHFRP42898 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
MTHFRP42898 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.16□□□□□ -1.42
MTHFRP42898 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
MTHFRP42898 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
MTHFRP42898 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
MTHFRP42898 AC011815.2-201ENST00000618230 2021 ntBASIC6.16□□□□□ -1.42
MTHFRP42898 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
MTHFRP42898 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
MTHFRP42898 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
MTHFRP42898 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
MTHFRP42898 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
MTHFRP42898 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.16□□□□□ -1.42
MTHFRP42898 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.16□□□□□ -1.42
MTHFRP42898 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.15□□□□□ -1.42
MTHFRP42898 AL592429.1-201ENST00000403909 1473 ntBASIC6.15□□□□□ -1.42
MTHFRP42898 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
MTHFRP42898 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.15□□□□□ -1.42
MTHFRP42898 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
MTHFRP42898 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
MTHFRP42898 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
MTHFRP42898 AC110373.1-201ENST00000505994 3505 ntBASIC6.15□□□□□ -1.42
MTHFRP42898 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
MTHFRP42898 AC011369.2-201ENST00000624423 1567 ntBASIC6.15□□□□□ -1.42
MTHFRP42898 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
MTHFRP42898 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.15□□□□□ -1.42
MTHFRP42898 YES1P1-201ENST00000418510 1628 ntBASIC6.15□□□□□ -1.42
MTHFRP42898 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.15□□□□□ -1.42
MTHFRP42898 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
MTHFRP42898 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
MTHFRP42898 RPS4XP5-201ENST00000419038 768 ntBASIC6.15□□□□□ -1.42
MTHFRP42898 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.15□□□□□ -1.42
MTHFRP42898 AC099677.3-201ENST00000427081 395 ntBASIC6.15□□□□□ -1.42
MTHFRP42898 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.15□□□□□ -1.42
MTHFRP42898 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.15□□□□□ -1.42
MTHFRP42898 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.15□□□□□ -1.42
MTHFRP42898 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.15□□□□□ -1.42
MTHFRP42898 RAB28P2-201ENST00000454299 641 ntBASIC6.15□□□□□ -1.42
MTHFRP42898 RNU6-775P-201ENST00000459318 96 ntBASIC6.15□□□□□ -1.42
MTHFRP42898 RPL7P39-201ENST00000481157 744 ntBASIC6.15□□□□□ -1.42
MTHFRP42898 RN7SL727P-201ENST00000482164 296 ntBASIC6.15□□□□□ -1.42
MTHFRP42898 AC093270.2-201ENST00000486157 792 ntBASIC6.15□□□□□ -1.42
MTHFRP42898 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.15□□□□□ -1.42
MTHFRP42898 AC113398.2-201ENST00000507630 558 ntBASIC6.15□□□□□ -1.42
MTHFRP42898 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.15□□□□□ -1.42
MTHFRP42898 RNA5SP92-201ENST00000516437 110 ntBASIC6.15□□□□□ -1.42
MTHFRP42898 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.15□□□□□ -1.42
MTHFRP42898 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.15□□□□□ -1.42
MTHFRP42898 AC025423.2-201ENST00000537570 439 ntBASIC6.15□□□□□ -1.42
MTHFRP42898 HAUS8P1-201ENST00000549005 542 ntBASIC6.15□□□□□ -1.42
MTHFRP42898 AC015720.2-201ENST00000567709 334 ntBASIC6.15□□□□□ -1.42
MTHFRP42898 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC6.15□□□□□ -1.42
MTHFRP42898 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.15□□□□□ -1.42
MTHFRP42898 AL356752.1-201ENST00000615844 593 ntBASIC6.15□□□□□ -1.42
MTHFRP42898 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.15□□□□□ -1.42
MTHFRP42898 MAPK10-350ENST00000641777 965 ntBASIC6.15□□□□□ -1.42
MTHFRP42898 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
MTHFRP42898 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
MTHFRP42898 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.15□□□□□ -1.43
MTHFRP42898 PABPC1P6-201ENST00000445594 1829 ntBASIC6.15□□□□□ -1.43
MTHFRP42898 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
MTHFRP42898 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
MTHFRP42898 CUL4AP1-201ENST00000514750 1863 ntBASIC6.15□□□□□ -1.43
MTHFRP42898 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
MTHFRP42898 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.43
MTHFRP42898 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
MTHFRP42898 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
MTHFRP42898 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MTHFRP42898 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.14□□□□□ -1.43
MTHFRP42898 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MTHFRP42898 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
MTHFRP42898 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.14□□□□□ -1.43
MTHFRP42898 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
MTHFRP42898 AL589994.1-201ENST00000404962 340 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms