Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC026782.2-201ENST00000510845 636 ntBASIC5.72□□□□□ -1.49
FDFT1P37268 AP004609.2-201ENST00000532177 190 ntBASIC5.72□□□□□ -1.49
FDFT1P37268 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.72□□□□□ -1.49
FDFT1P37268 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.72□□□□□ -1.49
FDFT1P37268 AC010503.3-201ENST00000594355 540 ntBASIC5.72□□□□□ -1.49
FDFT1P37268 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FDFT1P37268 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FDFT1P37268 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.72□□□□□ -1.49
FDFT1P37268 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.72□□□□□ -1.49
FDFT1P37268 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.72□□□□□ -1.49
FDFT1P37268 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FDFT1P37268 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.72□□□□□ -1.49
FDFT1P37268 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FDFT1P37268 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
FDFT1P37268 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.72□□□□□ -1.49
FDFT1P37268 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
FDFT1P37268 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.71□□□□□ -1.49
FDFT1P37268 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
FDFT1P37268 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.71□□□□□ -1.49
FDFT1P37268 AC068870.1-201ENST00000563737 2455 ntBASIC5.71□□□□□ -1.49
FDFT1P37268 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
FDFT1P37268 AL360270.2-201ENST00000562952 5985 ntBASIC5.71□□□□□ -1.49
FDFT1P37268 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FDFT1P37268 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FDFT1P37268 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FDFT1P37268 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FDFT1P37268 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.71□□□□□ -1.5
FDFT1P37268 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FDFT1P37268 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.71□□□□□ -1.5
FDFT1P37268 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.71□□□□□ -1.5
FDFT1P37268 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FDFT1P37268 SNORA64.1-201ENST00000362600 132 ntBASIC5.71□□□□□ -1.5
FDFT1P37268 AL050305.1-201ENST00000399993 1230 ntBASIC5.71□□□□□ -1.5
FDFT1P37268 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.71□□□□□ -1.5
FDFT1P37268 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.71□□□□□ -1.5
FDFT1P37268 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.71□□□□□ -1.5
FDFT1P37268 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.71□□□□□ -1.5
FDFT1P37268 AC110602.1-201ENST00000437414 318 ntBASIC5.71□□□□□ -1.5
FDFT1P37268 AL512637.1-201ENST00000439523 1231 ntBASIC5.71□□□□□ -1.5
FDFT1P37268 AC073465.2-201ENST00000440938 498 ntBASIC5.71□□□□□ -1.5
FDFT1P37268 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.71□□□□□ -1.5
FDFT1P37268 AP002884.1-201ENST00000479691 655 ntBASIC5.71□□□□□ -1.5
FDFT1P37268 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
FDFT1P37268 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.71□□□□□ -1.5
FDFT1P37268 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.71□□□□□ -1.5
FDFT1P37268 AC114781.3-201ENST00000512083 142 ntBASIC5.71□□□□□ -1.5
FDFT1P37268 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.71□□□□□ -1.5
FDFT1P37268 Vault.2-201ENST00000516519 98 ntBASIC5.71□□□□□ -1.5
FDFT1P37268 SNORA70.20-201ENST00000516848 126 ntBASIC5.71□□□□□ -1.5
FDFT1P37268 AC060775.1-201ENST00000518241 520 ntBASIC5.71□□□□□ -1.5
FDFT1P37268 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.71□□□□□ -1.5
FDFT1P37268 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.71□□□□□ -1.5
FDFT1P37268 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FDFT1P37268 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FDFT1P37268 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FDFT1P37268 AC009779.8-202ENST00000607990 932 ntBASIC5.71□□□□□ -1.5
FDFT1P37268 AC073593.1-201ENST00000624500 411 ntBASIC5.71□□□□□ -1.5
FDFT1P37268 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
FDFT1P37268 IFIT1P1-201ENST00000400497 1449 ntBASIC5.71□□□□□ -1.5
FDFT1P37268 MT-RNR2-201ENST00000387347 1559 ntBASIC5.71□□□□□ -1.5
FDFT1P37268 GVINP1-202ENST00000531871 7271 ntBASIC5.71□□□□□ -1.5
FDFT1P37268 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FDFT1P37268 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FDFT1P37268 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.71□□□□□ -1.5
FDFT1P37268 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.71□□□□□ -1.5
FDFT1P37268 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
FDFT1P37268 AC002525.1-201ENST00000624392 1622 ntBASIC5.7□□□□□ -1.5
FDFT1P37268 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
FDFT1P37268 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
FDFT1P37268 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
FDFT1P37268 NEPNP-201ENST00000404786 1371 ntBASIC5.7□□□□□ -1.5
FDFT1P37268 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.7□□□□□ -1.5
FDFT1P37268 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.7□□□□□ -1.5
FDFT1P37268 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.7□□□□□ -1.5
FDFT1P37268 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
FDFT1P37268 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.7□□□□□ -1.5
FDFT1P37268 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.7□□□□□ -1.5
FDFT1P37268 RPL7P56-201ENST00000429441 717 ntBASIC5.7□□□□□ -1.5
FDFT1P37268 HMGB3P24-201ENST00000433260 622 ntBASIC5.7□□□□□ -1.5
FDFT1P37268 NDUFB4P8-201ENST00000435351 367 ntBASIC5.7□□□□□ -1.5
FDFT1P37268 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.7□□□□□ -1.5
FDFT1P37268 AZGP1P2-201ENST00000454506 345 ntBASIC5.7□□□□□ -1.5
FDFT1P37268 AC135999.1-201ENST00000478962 479 ntBASIC5.7□□□□□ -1.5
FDFT1P37268 AC087672.1-201ENST00000479876 766 ntBASIC5.7□□□□□ -1.5
FDFT1P37268 AC138832.1-201ENST00000522871 556 ntBASIC5.7□□□□□ -1.5
FDFT1P37268 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.7□□□□□ -1.5
FDFT1P37268 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.7□□□□□ -1.5
FDFT1P37268 AC068305.2-201ENST00000550567 1205 ntBASIC5.7□□□□□ -1.5
FDFT1P37268 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.7□□□□□ -1.5
FDFT1P37268 AC092121.1-201ENST00000569452 202 ntBASIC5.7□□□□□ -1.5
FDFT1P37268 MIR4433B-201ENST00000581329 102 ntBASIC5.7□□□□□ -1.5
FDFT1P37268 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.7□□□□□ -1.5
FDFT1P37268 MIR7853-201ENST00000584820 132 ntBASIC5.7□□□□□ -1.5
FDFT1P37268 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.7□□□□□ -1.5
FDFT1P37268 RN7SL544P-201ENST00000617232 284 ntBASIC5.7□□□□□ -1.5
FDFT1P37268 RN7SL763P-201ENST00000620922 284 ntBASIC5.7□□□□□ -1.5
FDFT1P37268 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.7□□□□□ -1.5
FDFT1P37268 AL390318.1-201ENST00000624564 687 ntBASIC5.7□□□□□ -1.5
FDFT1P37268 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
FDFT1P37268 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms