Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 OSTCP1-201ENST00000455507 450 ntBASIC6.92□□□□□ -1.3
TM4SF1P30408 GYG1P1-201ENST00000460864 698 ntBASIC6.92□□□□□ -1.3
TM4SF1P30408 CEACAMP10-202ENST00000495431 496 ntBASIC6.92□□□□□ -1.3
TM4SF1P30408 AP000926.3-201ENST00000497201 299 ntBASIC6.92□□□□□ -1.3
TM4SF1P30408 TRIM36-IT1-201ENST00000503723 881 ntBASIC6.92□□□□□ -1.3
TM4SF1P30408 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.92□□□□□ -1.3
TM4SF1P30408 BRD9P1-201ENST00000529855 560 ntBASIC6.92□□□□□ -1.3
TM4SF1P30408 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.92□□□□□ -1.3
TM4SF1P30408 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.92□□□□□ -1.3
TM4SF1P30408 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.92□□□□□ -1.3
TM4SF1P30408 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TM4SF1P30408 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.92□□□□□ -1.3
TM4SF1P30408 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TM4SF1P30408 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
TM4SF1P30408 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
TM4SF1P30408 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.92□□□□□ -1.3
TM4SF1P30408 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.92□□□□□ -1.3
TM4SF1P30408 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TM4SF1P30408 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TM4SF1P30408 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
TM4SF1P30408 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.92□□□□□ -1.3
TM4SF1P30408 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
TM4SF1P30408 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TM4SF1P30408 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TM4SF1P30408 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
TM4SF1P30408 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
TM4SF1P30408 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.91□□□□□ -1.3
TM4SF1P30408 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TM4SF1P30408 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
TM4SF1P30408 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
TM4SF1P30408 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
TM4SF1P30408 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
TM4SF1P30408 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TM4SF1P30408 MTHFD2P5-201ENST00000320415 844 ntBASIC6.91□□□□□ -1.3
TM4SF1P30408 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
TM4SF1P30408 MIR141-201ENST00000384975 95 ntBASIC6.91□□□□□ -1.3
TM4SF1P30408 RNU1-149P-201ENST00000390870 161 ntBASIC6.91□□□□□ -1.3
TM4SF1P30408 OR4K12P-201ENST00000406538 961 ntBASIC6.91□□□□□ -1.3
TM4SF1P30408 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.91□□□□□ -1.3
TM4SF1P30408 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.91□□□□□ -1.3
TM4SF1P30408 AC092017.2-201ENST00000427600 362 ntBASIC6.91□□□□□ -1.3
TM4SF1P30408 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.91□□□□□ -1.3
TM4SF1P30408 AP002371.1-201ENST00000463604 433 ntBASIC6.91□□□□□ -1.3
TM4SF1P30408 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.91□□□□□ -1.3
TM4SF1P30408 HMGB1P44-201ENST00000508597 572 ntBASIC6.91□□□□□ -1.3
TM4SF1P30408 RNU4-18P-201ENST00000516751 149 ntBASIC6.91□□□□□ -1.3
TM4SF1P30408 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.91□□□□□ -1.3
TM4SF1P30408 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.91□□□□□ -1.3
TM4SF1P30408 AC011447.4-201ENST00000587562 111 ntBASIC6.91□□□□□ -1.3
TM4SF1P30408 AC087783.2-201ENST00000605070 562 ntBASIC6.91□□□□□ -1.3
TM4SF1P30408 AL683813.2-201ENST00000605245 502 ntBASIC6.91□□□□□ -1.3
TM4SF1P30408 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.91□□□□□ -1.3
TM4SF1P30408 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.91□□□□□ -1.3
TM4SF1P30408 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.91□□□□□ -1.3
TM4SF1P30408 CYP4F35P-202ENST00000636121 390 ntBASIC6.91□□□□□ -1.3
TM4SF1P30408 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
TM4SF1P30408 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
TM4SF1P30408 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.91□□□□□ -1.3
TM4SF1P30408 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.91□□□□□ -1.3
TM4SF1P30408 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.91□□□□□ -1.3
TM4SF1P30408 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
TM4SF1P30408 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.91□□□□□ -1.3
TM4SF1P30408 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.91□□□□□ -1.3
TM4SF1P30408 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TM4SF1P30408 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
TM4SF1P30408 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TM4SF1P30408 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
TM4SF1P30408 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
TM4SF1P30408 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TM4SF1P30408 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
TM4SF1P30408 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
TM4SF1P30408 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TM4SF1P30408 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
TM4SF1P30408 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.3
TM4SF1P30408 SNORA17.1-201ENST00000362945 126 ntBASIC6.9□□□□□ -1.3
TM4SF1P30408 SNORA51.8-201ENST00000384234 132 ntBASIC6.9□□□□□ -1.3
TM4SF1P30408 CYB5AP4-201ENST00000396692 399 ntBASIC6.9□□□□□ -1.3
TM4SF1P30408 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.9□□□□□ -1.3
TM4SF1P30408 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC6.9□□□□□ -1.3
TM4SF1P30408 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TM4SF1P30408 AC092647.3-201ENST00000443044 633 ntBASIC6.9□□□□□ -1.3
TM4SF1P30408 RPS29P33-201ENST00000456717 146 ntBASIC6.9□□□□□ -1.3
TM4SF1P30408 AL445687.2-201ENST00000458156 728 ntBASIC6.9□□□□□ -1.3
TM4SF1P30408 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.9□□□□□ -1.3
TM4SF1P30408 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.9□□□□□ -1.3
TM4SF1P30408 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
TM4SF1P30408 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.9□□□□□ -1.3
TM4SF1P30408 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.9□□□□□ -1.3
TM4SF1P30408 AC139697.1-201ENST00000548429 745 ntBASIC6.9□□□□□ -1.3
TM4SF1P30408 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.9□□□□□ -1.3
TM4SF1P30408 NMNAT1P5-201ENST00000559657 841 ntBASIC6.9□□□□□ -1.3
TM4SF1P30408 AC114947.2-201ENST00000565748 2125 ntBASIC6.9□□□□□ -1.3
TM4SF1P30408 DHFRP1-201ENST00000579682 559 ntBASIC6.9□□□□□ -1.3
TM4SF1P30408 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.9□□□□□ -1.3
TM4SF1P30408 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
TM4SF1P30408 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.9□□□□□ -1.3
TM4SF1P30408 AC105105.5-201ENST00000622635 1294 ntBASIC6.9□□□□□ -1.3
TM4SF1P30408 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.9□□□□□ -1.3
TM4SF1P30408 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
TM4SF1P30408 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC6.9□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms