Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.04□□□□□ -1.6
CD40LGP29965 GTF2IP14-201ENST00000441415 586 ntBASIC5.04□□□□□ -1.6
CD40LGP29965 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.04□□□□□ -1.6
CD40LGP29965 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.04□□□□□ -1.6
CD40LGP29965 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.04□□□□□ -1.6
CD40LGP29965 AC239798.3-201ENST00000454459 408 ntBASIC5.04□□□□□ -1.6
CD40LGP29965 AC019084.1-201ENST00000457337 432 ntBASIC5.04□□□□□ -1.6
CD40LGP29965 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.04□□□□□ -1.6
CD40LGP29965 AC104164.1-201ENST00000460282 590 ntBASIC5.04□□□□□ -1.6
CD40LGP29965 RPS7P10-201ENST00000464254 603 ntBASIC5.04□□□□□ -1.6
CD40LGP29965 AP000797.2-201ENST00000475768 606 ntBASIC5.04□□□□□ -1.6
CD40LGP29965 NPM1P29-201ENST00000483112 803 ntBASIC5.04□□□□□ -1.6
CD40LGP29965 RPS7P6-201ENST00000485777 579 ntBASIC5.04□□□□□ -1.6
CD40LGP29965 AC138517.1-201ENST00000515724 568 ntBASIC5.04□□□□□ -1.6
CD40LGP29965 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.04□□□□□ -1.6
CD40LGP29965 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.04□□□□□ -1.6
CD40LGP29965 OR56A7P-201ENST00000524865 941 ntBASIC5.04□□□□□ -1.6
CD40LGP29965 OR10D4P-201ENST00000525892 951 ntBASIC5.04□□□□□ -1.6
CD40LGP29965 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.04□□□□□ -1.6
CD40LGP29965 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.04□□□□□ -1.6
CD40LGP29965 AC010547.7-201ENST00000570323 333 ntBASIC5.04□□□□□ -1.6
CD40LGP29965 MIR5010-201ENST00000582846 120 ntBASIC5.04□□□□□ -1.6
CD40LGP29965 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.04□□□□□ -1.6
CD40LGP29965 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.04□□□□□ -1.6
CD40LGP29965 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.04□□□□□ -1.6
CD40LGP29965 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.04□□□□□ -1.6
CD40LGP29965 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.04□□□□□ -1.6
CD40LGP29965 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CD40LGP29965 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
CD40LGP29965 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD40LGP29965 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD40LGP29965 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD40LGP29965 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.04□□□□□ -1.6
CD40LGP29965 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD40LGP29965 STX3-208ENST00000641815 3236 ntBASIC5.04□□□□□ -1.6
CD40LGP29965 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD40LGP29965 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD40LGP29965 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CD40LGP29965 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CD40LGP29965 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CD40LGP29965 AC027088.4-201ENST00000611559 1947 ntBASIC5.03□□□□□ -1.6
CD40LGP29965 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CD40LGP29965 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
CD40LGP29965 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CD40LGP29965 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CD40LGP29965 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.03□□□□□ -1.6
CD40LGP29965 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CD40LGP29965 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CD40LGP29965 OR56A4-201ENST00000330728 1209 ntBASIC5.03□□□□□ -1.6
CD40LGP29965 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.03□□□□□ -1.6
CD40LGP29965 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CD40LGP29965 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CD40LGP29965 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CD40LGP29965 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.03□□□□□ -1.6
CD40LGP29965 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.03□□□□□ -1.6
CD40LGP29965 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.03□□□□□ -1.6
CD40LGP29965 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.03□□□□□ -1.6
CD40LGP29965 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.03□□□□□ -1.6
CD40LGP29965 AC064862.5-201ENST00000440618 334 ntBASIC5.03□□□□□ -1.6
CD40LGP29965 AC016772.1-201ENST00000444170 1261 ntBASIC5.03□□□□□ -1.6
CD40LGP29965 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CD40LGP29965 AC007383.1-201ENST00000445875 636 ntBASIC5.03□□□□□ -1.6
CD40LGP29965 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CD40LGP29965 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.03□□□□□ -1.6
CD40LGP29965 AC044810.1-201ENST00000480271 711 ntBASIC5.03□□□□□ -1.6
CD40LGP29965 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CD40LGP29965 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CD40LGP29965 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CD40LGP29965 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.03□□□□□ -1.6
CD40LGP29965 AC105384.2-201ENST00000508433 640 ntBASIC5.03□□□□□ -1.6
CD40LGP29965 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CD40LGP29965 AC092709.1-201ENST00000521355 1045 ntBASIC5.03□□□□□ -1.6
CD40LGP29965 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.03□□□□□ -1.6
CD40LGP29965 AC135983.3-201ENST00000528049 1226 ntBASIC5.03□□□□□ -1.6
CD40LGP29965 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CD40LGP29965 AC130364.2-201ENST00000528639 604 ntBASIC5.03□□□□□ -1.6
CD40LGP29965 AC005632.2-201ENST00000564271 828 ntBASIC5.03□□□□□ -1.6
CD40LGP29965 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.03□□□□□ -1.6
CD40LGP29965 AC133552.4-201ENST00000576103 676 ntBASIC5.03□□□□□ -1.6
CD40LGP29965 AP002884.5-201ENST00000595053 1132 ntBASIC5.03□□□□□ -1.6
CD40LGP29965 AC011891.2-201ENST00000604949 397 ntBASIC5.03□□□□□ -1.6
CD40LGP29965 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CD40LGP29965 MIR6885-201ENST00000612241 66 ntBASIC5.03□□□□□ -1.6
CD40LGP29965 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CD40LGP29965 AC244100.4-201ENST00000617747 388 ntBASIC5.03□□□□□ -1.6
CD40LGP29965 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CD40LGP29965 Z95331.1-201ENST00000623075 23112 ntBASIC5.03□□□□□ -1.6
CD40LGP29965 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CD40LGP29965 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CD40LGP29965 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CD40LGP29965 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CD40LGP29965 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.03□□□□□ -1.6
CD40LGP29965 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.03□□□□□ -1.6
CD40LGP29965 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CD40LGP29965 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CD40LGP29965 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CD40LGP29965 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CD40LGP29965 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.02□□□□□ -1.61
CD40LGP29965 CR382285.2-201ENST00000624662 1495 ntBASIC5.02□□□□□ -1.61
CD40LGP29965 AL359715.3-201ENST00000569267 2123 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms