Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.76□□□□□ -1.17
ERCC3P19447 XACT-201ENST00000468762 497 ntTSL 5 BASIC7.76□□□□□ -1.17
ERCC3P19447 AC091959.2-201ENST00000477363 321 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
ERCC3P19447 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
ERCC3P19447 RPL7AP23-201ENST00000482625 776 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC7.76□□□□□ -1.17
ERCC3P19447 AC093870.1-201ENST00000506837 213 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 HMGN1P16-201ENST00000508308 283 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 AC011853.1-201ENST00000518911 454 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 OR52K3P-201ENST00000531655 943 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC7.76□□□□□ -1.17
ERCC3P19447 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC7.76□□□□□ -1.17
ERCC3P19447 AL442163.2-201ENST00000553912 710 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC7.76□□□□□ -1.17
ERCC3P19447 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC7.76□□□□□ -1.17
ERCC3P19447 ANP32BP1-202ENST00000568553 737 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 AL354943.1-201ENST00000572103 781 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 MIR5708-201ENST00000579723 85 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
ERCC3P19447 AC010620.1-201ENST00000601088 1102 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC7.76□□□□□ -1.17
ERCC3P19447 AL513218.1-201ENST00000606527 391 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 MIR6778-201ENST00000617912 73 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 AL158163.2-201ENST00000619110 700 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 AC139792.2-201ENST00000624218 587 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 AC073592.6-201ENST00000624271 415 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
ERCC3P19447 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
ERCC3P19447 CASC19-232ENST00000641480 1244 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.76□□□□□ -1.17
ERCC3P19447 AL359195.2-201ENST00000623657 4412 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC7.76□□□□□ -1.17
ERCC3P19447 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
ERCC3P19447 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
ERCC3P19447 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
ERCC3P19447 MAPK10-357ENST00000641831 2858 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.76□□□□□ -1.17
ERCC3P19447 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
ERCC3P19447 EEF1A1P21-201ENST00000512363 1344 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
ERCC3P19447 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
ERCC3P19447 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
ERCC3P19447 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.75□□□□□ -1.17
ERCC3P19447 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.75□□□□□ -1.17
ERCC3P19447 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.75□□□□□ -1.17
ERCC3P19447 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.75□□□□□ -1.17
ERCC3P19447 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
ERCC3P19447 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
ERCC3P19447 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
ERCC3P19447 AC007406.5-201ENST00000570140 3170 ntBASIC7.75□□□□□ -1.17
ERCC3P19447 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
ERCC3P19447 AL391419.1-201ENST00000398901 1275 ntBASIC7.75□□□□□ -1.17
ERCC3P19447 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
ERCC3P19447 MIR1282-201ENST00000408865 101 ntBASIC7.75□□□□□ -1.17
ERCC3P19447 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.75□□□□□ -1.17
ERCC3P19447 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.75□□□□□ -1.17
ERCC3P19447 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC7.75□□□□□ -1.17
ERCC3P19447 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC7.75□□□□□ -1.17
ERCC3P19447 CYP4F32P-201ENST00000426492 504 ntBASIC7.75□□□□□ -1.17
ERCC3P19447 AC097721.1-201ENST00000427150 1253 ntBASIC7.75□□□□□ -1.17
ERCC3P19447 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC7.75□□□□□ -1.17
ERCC3P19447 AC234064.1-201ENST00000436312 247 ntBASIC7.75□□□□□ -1.17
ERCC3P19447 MRPS21P3-201ENST00000436696 262 ntBASIC7.75□□□□□ -1.17
ERCC3P19447 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
ERCC3P19447 UBBP5-201ENST00000446970 266 ntBASIC7.75□□□□□ -1.17
ERCC3P19447 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.75□□□□□ -1.17
ERCC3P19447 AL034399.1-201ENST00000451535 380 ntBASIC7.75□□□□□ -1.17
ERCC3P19447 RPL26P30-201ENST00000453533 435 ntBASIC7.75□□□□□ -1.17
ERCC3P19447 ATP5A1P7-201ENST00000453978 1279 ntBASIC7.75□□□□□ -1.17
ERCC3P19447 AC135721.2-201ENST00000464237 300 ntBASIC7.75□□□□□ -1.17
ERCC3P19447 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC7.75□□□□□ -1.17
ERCC3P19447 MTND2P14-201ENST00000482139 351 ntBASIC7.75□□□□□ -1.17
ERCC3P19447 PFN1P8-201ENST00000497012 543 ntBASIC7.75□□□□□ -1.17
ERCC3P19447 AC138938.1-201ENST00000515431 782 ntBASIC7.75□□□□□ -1.17
ERCC3P19447 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.75□□□□□ -1.17
ERCC3P19447 EEF1B2P2-201ENST00000519625 676 ntBASIC7.75□□□□□ -1.17
ERCC3P19447 MTND2P26-201ENST00000528255 1029 ntBASIC7.75□□□□□ -1.17
ERCC3P19447 NPIPB14P-203ENST00000532298 987 ntBASIC7.75□□□□□ -1.17
ERCC3P19447 OR4A21P-201ENST00000532759 944 ntBASIC7.75□□□□□ -1.17
ERCC3P19447 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.75□□□□□ -1.17
ERCC3P19447 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.75□□□□□ -1.17
ERCC3P19447 CTSLP2-201ENST00000580501 394 ntBASIC7.75□□□□□ -1.17
ERCC3P19447 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.75□□□□□ -1.17
ERCC3P19447 AC114477.1-201ENST00000605097 605 ntBASIC7.75□□□□□ -1.17
ERCC3P19447 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.75□□□□□ -1.17
ERCC3P19447 MIR6071-201ENST00000616741 78 ntBASIC7.75□□□□□ -1.17
ERCC3P19447 LGI1-209ENST00000627699 664 ntTSL 3 BASIC7.75□□□□□ -1.17
ERCC3P19447 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.75□□□□□ -1.17
ERCC3P19447 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC7.75□□□□□ -1.17
ERCC3P19447 AC010325.3-201ENST00000641084 394 ntBASIC7.75□□□□□ -1.17
ERCC3P19447 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
ERCC3P19447 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
ERCC3P19447 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
ERCC3P19447 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.75□□□□□ -1.17
ERCC3P19447 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
ERCC3P19447 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.75□□□□□ -1.17
ERCC3P19447 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
ERCC3P19447 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
ERCC3P19447 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms