Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 SCARNA6.1-201ENST00000516989 238 ntBASIC6.02□□□□□ -1.45
PDGFRAP16234 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.02□□□□□ -1.45
PDGFRAP16234 AC027026.1-201ENST00000532323 742 ntBASIC6.02□□□□□ -1.45
PDGFRAP16234 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.02□□□□□ -1.45
PDGFRAP16234 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.02□□□□□ -1.45
PDGFRAP16234 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.02□□□□□ -1.45
PDGFRAP16234 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.02□□□□□ -1.45
PDGFRAP16234 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.02□□□□□ -1.45
PDGFRAP16234 NANOGP3-201ENST00000605855 286 ntBASIC6.02□□□□□ -1.45
PDGFRAP16234 AL035661.1-201ENST00000620459 1144 ntBASIC6.02□□□□□ -1.45
PDGFRAP16234 AP001153.1-201ENST00000641024 338 ntBASIC6.02□□□□□ -1.45
PDGFRAP16234 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFRAP16234 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
PDGFRAP16234 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFRAP16234 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
PDGFRAP16234 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFRAP16234 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFRAP16234 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.02□□□□□ -1.45
PDGFRAP16234 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFRAP16234 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.02□□□□□ -1.45
PDGFRAP16234 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFRAP16234 AL161912.4-201ENST00000623889 2468 ntBASIC6.02□□□□□ -1.45
PDGFRAP16234 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFRAP16234 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFRAP16234 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFRAP16234 NAMPTP1-201ENST00000440465 2514 ntBASIC6.01□□□□□ -1.45
PDGFRAP16234 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFRAP16234 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFRAP16234 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
PDGFRAP16234 AC106872.5-201ENST00000508856 1416 ntBASIC6.01□□□□□ -1.45
PDGFRAP16234 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.01□□□□□ -1.45
PDGFRAP16234 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFRAP16234 AC093909.5-201ENST00000621839 1799 ntBASIC6.01□□□□□ -1.45
PDGFRAP16234 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
PDGFRAP16234 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFRAP16234 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFRAP16234 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
PDGFRAP16234 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFRAP16234 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
PDGFRAP16234 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.01□□□□□ -1.45
PDGFRAP16234 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFRAP16234 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
PDGFRAP16234 U3.10-201ENST00000364459 214 ntBASIC6.01□□□□□ -1.45
PDGFRAP16234 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.01□□□□□ -1.45
PDGFRAP16234 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFRAP16234 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
PDGFRAP16234 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
PDGFRAP16234 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
PDGFRAP16234 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFRAP16234 AC007068.1-201ENST00000396690 844 ntBASIC6.01□□□□□ -1.45
PDGFRAP16234 EEF1B2P8-201ENST00000414101 671 ntBASIC6.01□□□□□ -1.45
PDGFRAP16234 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.01□□□□□ -1.45
PDGFRAP16234 AK4P4-201ENST00000419465 646 ntBASIC6.01□□□□□ -1.45
PDGFRAP16234 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.01□□□□□ -1.45
PDGFRAP16234 RPS17P15-201ENST00000475609 349 ntBASIC6.01□□□□□ -1.45
PDGFRAP16234 RN7SL570P-201ENST00000484405 292 ntBASIC6.01□□□□□ -1.45
PDGFRAP16234 RPL32P33-201ENST00000487023 394 ntBASIC6.01□□□□□ -1.45
PDGFRAP16234 DUTP1-201ENST00000493631 470 ntBASIC6.01□□□□□ -1.45
PDGFRAP16234 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.01□□□□□ -1.45
PDGFRAP16234 SNORA70.20-201ENST00000516848 126 ntBASIC6.01□□□□□ -1.45
PDGFRAP16234 AC021678.3-201ENST00000517893 476 ntBASIC6.01□□□□□ -1.45
PDGFRAP16234 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.01□□□□□ -1.45
PDGFRAP16234 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
PDGFRAP16234 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.01□□□□□ -1.45
PDGFRAP16234 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.01□□□□□ -1.45
PDGFRAP16234 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.01□□□□□ -1.45
PDGFRAP16234 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.01□□□□□ -1.45
PDGFRAP16234 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.01□□□□□ -1.45
PDGFRAP16234 AP000919.1-201ENST00000582850 985 ntBASIC6.01□□□□□ -1.45
PDGFRAP16234 AC008691.1-209ENST00000642094 814 ntBASIC6.01□□□□□ -1.45
PDGFRAP16234 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFRAP16234 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFRAP16234 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFRAP16234 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
PDGFRAP16234 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6□□□□□ -1.45
PDGFRAP16234 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
PDGFRAP16234 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PDGFRAP16234 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6□□□□□ -1.45
PDGFRAP16234 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PDGFRAP16234 TMSB4XP4-201ENST00000323496 618 ntBASIC6□□□□□ -1.45
PDGFRAP16234 AL159987.1-201ENST00000347911 293 ntBASIC6□□□□□ -1.45
PDGFRAP16234 OR7E101P-201ENST00000400428 513 ntBASIC6□□□□□ -1.45
PDGFRAP16234 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDGFRAP16234 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6□□□□□ -1.45
PDGFRAP16234 RN7SKP17-201ENST00000411242 351 ntBASIC6□□□□□ -1.45
PDGFRAP16234 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6□□□□□ -1.45
PDGFRAP16234 RNGTTP1-201ENST00000420965 728 ntBASIC6□□□□□ -1.45
PDGFRAP16234 AC104843.2-201ENST00000427666 297 ntBASIC6□□□□□ -1.45
PDGFRAP16234 AC242426.1-201ENST00000435270 960 ntBASIC6□□□□□ -1.45
PDGFRAP16234 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6□□□□□ -1.45
PDGFRAP16234 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6□□□□□ -1.45
PDGFRAP16234 RPL31P15-201ENST00000449770 338 ntBASIC6□□□□□ -1.45
PDGFRAP16234 AL445665.1-202ENST00000452436 324 ntBASIC6□□□□□ -1.45
PDGFRAP16234 SETP20-201ENST00000457046 852 ntBASIC6□□□□□ -1.45
PDGFRAP16234 RPSAP37-201ENST00000470913 821 ntBASIC6□□□□□ -1.45
PDGFRAP16234 RPS7P6-201ENST00000485777 579 ntBASIC6□□□□□ -1.45
PDGFRAP16234 AC009120.1-201ENST00000493458 473 ntBASIC6□□□□□ -1.45
PDGFRAP16234 AC104109.1-201ENST00000498563 436 ntBASIC6□□□□□ -1.45
PDGFRAP16234 AC090058.1-201ENST00000498788 435 ntBASIC6□□□□□ -1.45
PDGFRAP16234 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms