Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 RN7SL188P-201ENST00000469842 285 ntBASIC4.27□□□□□ -1.73
CXCL1P09341 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.27□□□□□ -1.73
CXCL1P09341 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.27□□□□□ -1.73
CXCL1P09341 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.27□□□□□ -1.73
CXCL1P09341 AC008629.2-201ENST00000503783 483 ntBASIC4.27□□□□□ -1.73
CXCL1P09341 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC4.27□□□□□ -1.73
CXCL1P09341 AC021106.1-201ENST00000509020 1058 ntBASIC4.27□□□□□ -1.73
CXCL1P09341 AC074255.1-201ENST00000511259 501 ntBASIC4.27□□□□□ -1.73
CXCL1P09341 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.27□□□□□ -1.73
CXCL1P09341 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC4.27□□□□□ -1.73
CXCL1P09341 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.27□□□□□ -1.73
CXCL1P09341 CDC42P3-201ENST00000518493 633 ntBASIC4.27□□□□□ -1.73
CXCL1P09341 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.27□□□□□ -1.73
CXCL1P09341 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.27□□□□□ -1.73
CXCL1P09341 AC036111.2-201ENST00000533247 901 ntBASIC4.27□□□□□ -1.73
CXCL1P09341 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CXCL1P09341 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CXCL1P09341 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC4.27□□□□□ -1.73
CXCL1P09341 AL078624.2-201ENST00000605063 554 ntBASIC4.27□□□□□ -1.73
CXCL1P09341 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC4.27□□□□□ -1.73
CXCL1P09341 AL353600.1-201ENST00000608148 251 ntBASIC4.27□□□□□ -1.73
CXCL1P09341 AC068726.1-201ENST00000610993 341 ntBASIC4.27□□□□□ -1.73
CXCL1P09341 AC025574.2-201ENST00000615621 514 ntBASIC4.27□□□□□ -1.73
CXCL1P09341 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.27□□□□□ -1.73
CXCL1P09341 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.27□□□□□ -1.73
CXCL1P09341 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.27□□□□□ -1.73
CXCL1P09341 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
CXCL1P09341 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC4.27□□□□□ -1.73
CXCL1P09341 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CXCL1P09341 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CXCL1P09341 AP001273.1-201ENST00000624493 3152 ntBASIC4.27□□□□□ -1.73
CXCL1P09341 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CXCL1P09341 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CXCL1P09341 RBPJP5-201ENST00000449433 1447 ntBASIC4.27□□□□□ -1.73
CXCL1P09341 AL022322.2-201ENST00000624072 20397 ntBASIC4.27□□□□□ -1.73
CXCL1P09341 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC4.27□□□□□ -1.73
CXCL1P09341 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC4.27□□□□□ -1.73
CXCL1P09341 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CXCL1P09341 AC003973.3-201ENST00000624863 2822 ntBASIC4.27□□□□□ -1.73
CXCL1P09341 AL513548.1-201ENST00000562904 1724 ntBASIC4.26□□□□□ -1.73
CXCL1P09341 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CXCL1P09341 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.26□□□□□ -1.73
CXCL1P09341 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CXCL1P09341 Z95327.2-201ENST00000414579 1873 ntBASIC4.26□□□□□ -1.73
CXCL1P09341 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CXCL1P09341 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CXCL1P09341 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CXCL1P09341 Z83820.1-201ENST00000456978 1499 ntBASIC4.26□□□□□ -1.73
CXCL1P09341 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CXCL1P09341 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CXCL1P09341 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CXCL1P09341 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CXCL1P09341 RPL11P4-201ENST00000332269 436 ntBASIC4.26□□□□□ -1.73
CXCL1P09341 YWHAZP4-201ENST00000392459 708 ntBASIC4.26□□□□□ -1.73
CXCL1P09341 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.26□□□□□ -1.73
CXCL1P09341 AC016739.1-201ENST00000405359 345 ntBASIC4.26□□□□□ -1.73
CXCL1P09341 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC4.26□□□□□ -1.73
CXCL1P09341 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.26□□□□□ -1.73
CXCL1P09341 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC4.26□□□□□ -1.73
CXCL1P09341 KIF4CP-201ENST00000422742 1279 ntBASIC4.26□□□□□ -1.73
CXCL1P09341 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC4.26□□□□□ -1.73
CXCL1P09341 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC4.26□□□□□ -1.73
CXCL1P09341 PSMD10P2-201ENST00000432890 672 ntBASIC4.26□□□□□ -1.73
CXCL1P09341 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.26□□□□□ -1.73
CXCL1P09341 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC4.26□□□□□ -1.73
CXCL1P09341 DUTP1-201ENST00000493631 470 ntBASIC4.26□□□□□ -1.73
CXCL1P09341 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.26□□□□□ -1.73
CXCL1P09341 AC073648.3-201ENST00000504939 925 ntBASIC4.26□□□□□ -1.73
CXCL1P09341 HMGN1P9-201ENST00000515212 298 ntBASIC4.26□□□□□ -1.73
CXCL1P09341 RN7SKP253-201ENST00000516424 309 ntBASIC4.26□□□□□ -1.73
CXCL1P09341 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.26□□□□□ -1.73
CXCL1P09341 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CXCL1P09341 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.26□□□□□ -1.73
CXCL1P09341 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CXCL1P09341 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC4.26□□□□□ -1.73
CXCL1P09341 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.26□□□□□ -1.73
CXCL1P09341 GARSP1-201ENST00000570895 719 ntBASIC4.26□□□□□ -1.73
CXCL1P09341 MED31-202ENST00000574128 619 ntTSL 3 BASIC4.26□□□□□ -1.73
CXCL1P09341 AC068408.1-201ENST00000577406 1144 ntBASIC4.26□□□□□ -1.73
CXCL1P09341 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC4.26□□□□□ -1.73
CXCL1P09341 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC4.26□□□□□ -1.73
CXCL1P09341 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.26□□□□□ -1.73
CXCL1P09341 AC015914.2-201ENST00000618167 288 ntBASIC4.26□□□□□ -1.73
CXCL1P09341 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.26□□□□□ -1.73
CXCL1P09341 AC073488.3-201ENST00000631611 778 ntBASIC4.26□□□□□ -1.73
CXCL1P09341 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC4.26□□□□□ -1.73
CXCL1P09341 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CXCL1P09341 LINC01613-201ENST00000561476 2780 ntBASIC4.26□□□□□ -1.73
CXCL1P09341 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
CXCL1P09341 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.26□□□□□ -1.73
CXCL1P09341 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CXCL1P09341 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CXCL1P09341 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
CXCL1P09341 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.26□□□□□ -1.73
CXCL1P09341 Z95331.1-201ENST00000623075 23112 ntBASIC4.26□□□□□ -1.73
CXCL1P09341 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CXCL1P09341 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CXCL1P09341 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.25□□□□□ -1.73
CXCL1P09341 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CXCL1P09341 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms