Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CAPN1P07384 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
CAPN1P07384 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CAPN1P07384 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.68□□□□□ -1.5
CAPN1P07384 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
CAPN1P07384 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CAPN1P07384 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CAPN1P07384 AC027088.4-201ENST00000611559 1947 ntBASIC5.68□□□□□ -1.5
CAPN1P07384 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CAPN1P07384 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CAPN1P07384 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CAPN1P07384 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CAPN1P07384 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CAPN1P07384 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.68□□□□□ -1.5
CAPN1P07384 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CAPN1P07384 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CAPN1P07384 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CAPN1P07384 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CAPN1P07384 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.68□□□□□ -1.5
CAPN1P07384 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.68□□□□□ -1.5
CAPN1P07384 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.68□□□□□ -1.5
CAPN1P07384 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.68□□□□□ -1.5
CAPN1P07384 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.68□□□□□ -1.5
CAPN1P07384 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.68□□□□□ -1.5
CAPN1P07384 AL122020.1-201ENST00000472287 459 ntBASIC5.68□□□□□ -1.5
CAPN1P07384 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.68□□□□□ -1.5
CAPN1P07384 PDCL3P4-201ENST00000489621 720 ntBASIC5.68□□□□□ -1.5
CAPN1P07384 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.68□□□□□ -1.5
CAPN1P07384 SUMO2P4-201ENST00000504193 276 ntBASIC5.68□□□□□ -1.5
CAPN1P07384 AC011411.1-201ENST00000509592 876 ntBASIC5.68□□□□□ -1.5
CAPN1P07384 AC106872.4-201ENST00000510050 523 ntBASIC5.68□□□□□ -1.5
CAPN1P07384 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.68□□□□□ -1.5
CAPN1P07384 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.68□□□□□ -1.5
CAPN1P07384 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.68□□□□□ -1.5
CAPN1P07384 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.68□□□□□ -1.5
CAPN1P07384 MIR4776-2-201ENST00000580204 80 ntBASIC5.68□□□□□ -1.5
CAPN1P07384 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.68□□□□□ -1.5
CAPN1P07384 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.68□□□□□ -1.5
CAPN1P07384 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.68□□□□□ -1.5
CAPN1P07384 AL589935.2-201ENST00000616471 1231 ntBASIC5.68□□□□□ -1.5
CAPN1P07384 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.68□□□□□ -1.5
CAPN1P07384 AC073869.7-201ENST00000640874 297 ntBASIC5.68□□□□□ -1.5
CAPN1P07384 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.68□□□□□ -1.5
CAPN1P07384 AC116158.1-201ENST00000560231 2129 ntBASIC5.68□□□□□ -1.5
CAPN1P07384 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CAPN1P07384 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CAPN1P07384 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CAPN1P07384 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CAPN1P07384 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CAPN1P07384 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CAPN1P07384 AL158152.1-201ENST00000602652 1435 ntBASIC5.67□□□□□ -1.5
CAPN1P07384 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CAPN1P07384 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CAPN1P07384 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CAPN1P07384 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CAPN1P07384 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CAPN1P07384 SELENOWP1-201ENST00000322792 252 ntBASIC5.67□□□□□ -1.5
CAPN1P07384 TMSB4XP4-201ENST00000323496 618 ntBASIC5.67□□□□□ -1.5
CAPN1P07384 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CAPN1P07384 KIF4CP-201ENST00000422742 1279 ntBASIC5.67□□□□□ -1.5
CAPN1P07384 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.67□□□□□ -1.5
CAPN1P07384 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.67□□□□□ -1.5
CAPN1P07384 RPL12P18-201ENST00000437175 325 ntBASIC5.67□□□□□ -1.5
CAPN1P07384 BMS1P10-201ENST00000443754 1120 ntBASIC5.67□□□□□ -1.5
CAPN1P07384 AL161636.2-201ENST00000445179 927 ntBASIC5.67□□□□□ -1.5
CAPN1P07384 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.67□□□□□ -1.5
CAPN1P07384 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.67□□□□□ -1.5
CAPN1P07384 AC004129.2-201ENST00000457229 287 ntBASIC5.67□□□□□ -1.5
CAPN1P07384 RN7SL174P-201ENST00000475578 289 ntBASIC5.67□□□□□ -1.5
CAPN1P07384 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.67□□□□□ -1.5
CAPN1P07384 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CAPN1P07384 AC020937.1-201ENST00000519677 1013 ntBASIC5.67□□□□□ -1.5
CAPN1P07384 AC136777.2-201ENST00000522979 358 ntBASIC5.67□□□□□ -1.5
CAPN1P07384 WBP1LP3-201ENST00000523033 208 ntBASIC5.67□□□□□ -1.5
CAPN1P07384 PCNAP4-201ENST00000532690 730 ntBASIC5.67□□□□□ -1.5
CAPN1P07384 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
CAPN1P07384 AC027544.3-201ENST00000535082 757 ntBASIC5.67□□□□□ -1.5
CAPN1P07384 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.67□□□□□ -1.5
CAPN1P07384 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.67□□□□□ -1.5
CAPN1P07384 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.67□□□□□ -1.5
CAPN1P07384 AL356801.1-201ENST00000559320 294 ntBASIC5.67□□□□□ -1.5
CAPN1P07384 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.67□□□□□ -1.5
CAPN1P07384 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.67□□□□□ -1.5
CAPN1P07384 COX6CP7-201ENST00000597056 208 ntBASIC5.67□□□□□ -1.5
CAPN1P07384 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CAPN1P07384 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.67□□□□□ -1.5
CAPN1P07384 OR51C1P-201ENST00000608504 942 ntBASIC5.67□□□□□ -1.5
CAPN1P07384 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.67□□□□□ -1.5
CAPN1P07384 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.67□□□□□ -1.5
CAPN1P07384 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CAPN1P07384 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CAPN1P07384 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CAPN1P07384 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CAPN1P07384 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CAPN1P07384 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CAPN1P07384 AP004607.3-201ENST00000530354 3915 ntBASIC5.67□□□□□ -1.5
CAPN1P07384 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.67□□□□□ -1.5
CAPN1P07384 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CAPN1P07384 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.67□□□□□ -1.5
CAPN1P07384 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms