Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
APOA4P06727 AC008627.1-201ENST00000517511 1704 ntBASIC5.91□□□□□ -1.46
APOA4P06727 AC093225.1-201ENST00000506867 1408 ntBASIC5.91□□□□□ -1.46
APOA4P06727 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.9□□□□□ -1.46
APOA4P06727 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
APOA4P06727 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
APOA4P06727 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.9□□□□□ -1.46
APOA4P06727 AC125336.1-201ENST00000508893 2827 ntBASIC5.9□□□□□ -1.46
APOA4P06727 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.9□□□□□ -1.46
APOA4P06727 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
APOA4P06727 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.9□□□□□ -1.46
APOA4P06727 UGT2B24P-201ENST00000514441 1597 ntBASIC5.9□□□□□ -1.46
APOA4P06727 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
APOA4P06727 RNA5SP453-201ENST00000362503 119 ntBASIC5.9□□□□□ -1.46
APOA4P06727 SNORD65-201ENST00000391079 73 ntBASIC5.9□□□□□ -1.46
APOA4P06727 RPL5P19-201ENST00000404228 893 ntBASIC5.9□□□□□ -1.46
APOA4P06727 AC099535.1-201ENST00000408928 371 ntBASIC5.9□□□□□ -1.46
APOA4P06727 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.9□□□□□ -1.46
APOA4P06727 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.9□□□□□ -1.46
APOA4P06727 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.9□□□□□ -1.46
APOA4P06727 ARL5AP3-201ENST00000439327 386 ntBASIC5.9□□□□□ -1.46
APOA4P06727 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.9□□□□□ -1.46
APOA4P06727 AL157884.3-201ENST00000448273 1184 ntBASIC5.9□□□□□ -1.46
APOA4P06727 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.9□□□□□ -1.46
APOA4P06727 HSPE1P22-201ENST00000456856 327 ntBASIC5.9□□□□□ -1.46
APOA4P06727 AC104164.1-201ENST00000460282 590 ntBASIC5.9□□□□□ -1.46
APOA4P06727 AC068228.1-201ENST00000461723 211 ntBASIC5.9□□□□□ -1.46
APOA4P06727 RN7SL168P-201ENST00000463821 279 ntBASIC5.9□□□□□ -1.46
APOA4P06727 PFN1P6-201ENST00000476786 399 ntBASIC5.9□□□□□ -1.46
APOA4P06727 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
APOA4P06727 AL158068.1-201ENST00000506116 616 ntBASIC5.9□□□□□ -1.46
APOA4P06727 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.9□□□□□ -1.46
APOA4P06727 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.9□□□□□ -1.46
APOA4P06727 AC011853.1-201ENST00000518911 454 ntBASIC5.9□□□□□ -1.46
APOA4P06727 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.9□□□□□ -1.46
APOA4P06727 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.9□□□□□ -1.46
APOA4P06727 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.9□□□□□ -1.46
APOA4P06727 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.9□□□□□ -1.46
APOA4P06727 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.9□□□□□ -1.46
APOA4P06727 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.9□□□□□ -1.46
APOA4P06727 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.9□□□□□ -1.46
APOA4P06727 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.9□□□□□ -1.46
APOA4P06727 AC079791.1-201ENST00000605356 973 ntBASIC5.9□□□□□ -1.46
APOA4P06727 AP001437.1-201ENST00000608783 456 ntBASIC5.9□□□□□ -1.46
APOA4P06727 uc_338.26-201ENST00000612659 160 ntBASIC5.9□□□□□ -1.46
APOA4P06727 AC016911.1-201ENST00000613297 452 ntBASIC5.9□□□□□ -1.46
APOA4P06727 AC073575.2-201ENST00000614212 627 ntBASIC5.9□□□□□ -1.46
APOA4P06727 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.9□□□□□ -1.46
APOA4P06727 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.9□□□□□ -1.46
APOA4P06727 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.9□□□□□ -1.46
APOA4P06727 AC015799.1-201ENST00000622996 3122 ntBASIC5.9□□□□□ -1.46
APOA4P06727 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
APOA4P06727 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.9□□□□□ -1.47
APOA4P06727 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
APOA4P06727 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
APOA4P06727 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
APOA4P06727 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
APOA4P06727 AC012254.3-201ENST00000591183 2117 ntBASIC5.9□□□□□ -1.47
APOA4P06727 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.9□□□□□ -1.47
APOA4P06727 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.9□□□□□ -1.47
APOA4P06727 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
APOA4P06727 RBPJP7-201ENST00000442803 1447 ntBASIC5.9□□□□□ -1.47
APOA4P06727 RBPJP5-201ENST00000449433 1447 ntBASIC5.9□□□□□ -1.47
APOA4P06727 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.47
APOA4P06727 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.9□□□□□ -1.47
APOA4P06727 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
APOA4P06727 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.89□□□□□ -1.47
APOA4P06727 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
APOA4P06727 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.89□□□□□ -1.47
APOA4P06727 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
APOA4P06727 AC015689.2-201ENST00000528172 1738 ntBASIC5.89□□□□□ -1.47
APOA4P06727 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
APOA4P06727 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
APOA4P06727 COX6B1P3-201ENST00000312310 260 ntBASIC5.89□□□□□ -1.47
APOA4P06727 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
APOA4P06727 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
APOA4P06727 RN7SKP187-201ENST00000365536 330 ntBASIC5.89□□□□□ -1.47
APOA4P06727 U3.23-201ENST00000391132 200 ntBASIC5.89□□□□□ -1.47
APOA4P06727 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
APOA4P06727 ST13P16-201ENST00000401760 781 ntBASIC5.89□□□□□ -1.47
APOA4P06727 RPL10P10-201ENST00000403509 664 ntBASIC5.89□□□□□ -1.47
APOA4P06727 RN7SKP279-201ENST00000411383 298 ntBASIC5.89□□□□□ -1.47
APOA4P06727 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.89□□□□□ -1.47
APOA4P06727 AC099677.3-201ENST00000427081 395 ntBASIC5.89□□□□□ -1.47
APOA4P06727 MGAT2P2-201ENST00000427194 797 ntBASIC5.89□□□□□ -1.47
APOA4P06727 CRIP1P1-201ENST00000427567 185 ntBASIC5.89□□□□□ -1.47
APOA4P06727 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.89□□□□□ -1.47
APOA4P06727 NDUFA5P1-201ENST00000433858 341 ntBASIC5.89□□□□□ -1.47
APOA4P06727 AC096775.1-201ENST00000437724 448 ntBASIC5.89□□□□□ -1.47
APOA4P06727 CYCSP51-201ENST00000443545 318 ntBASIC5.89□□□□□ -1.47
APOA4P06727 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.89□□□□□ -1.47
APOA4P06727 AL445466.1-201ENST00000448432 357 ntBASIC5.89□□□□□ -1.47
APOA4P06727 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.89□□□□□ -1.47
APOA4P06727 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.89□□□□□ -1.47
APOA4P06727 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.89□□□□□ -1.47
APOA4P06727 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.89□□□□□ -1.47
APOA4P06727 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.89□□□□□ -1.47
APOA4P06727 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.89□□□□□ -1.47
APOA4P06727 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
APOA4P06727 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms