Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.84□□□□□ -1.31
HLA-DOAP06340 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HLA-DOAP06340 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HLA-DOAP06340 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.84□□□□□ -1.31
HLA-DOAP06340 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.84□□□□□ -1.31
HLA-DOAP06340 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
HLA-DOAP06340 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
HLA-DOAP06340 AL159987.1-201ENST00000347911 293 ntBASIC6.84□□□□□ -1.31
HLA-DOAP06340 RN7SKP160-201ENST00000363804 340 ntBASIC6.84□□□□□ -1.31
HLA-DOAP06340 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.84□□□□□ -1.31
HLA-DOAP06340 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.84□□□□□ -1.31
HLA-DOAP06340 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.84□□□□□ -1.31
HLA-DOAP06340 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.84□□□□□ -1.31
HLA-DOAP06340 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.84□□□□□ -1.31
HLA-DOAP06340 FMO7P-201ENST00000436045 768 ntBASIC6.84□□□□□ -1.31
HLA-DOAP06340 AL353718.1-201ENST00000451028 517 ntBASIC6.84□□□□□ -1.31
HLA-DOAP06340 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.84□□□□□ -1.31
HLA-DOAP06340 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.84□□□□□ -1.31
HLA-DOAP06340 HMGN1P8-201ENST00000463578 288 ntBASIC6.84□□□□□ -1.31
HLA-DOAP06340 RPS26P39-201ENST00000469206 341 ntBASIC6.84□□□□□ -1.31
HLA-DOAP06340 AC087672.1-201ENST00000479876 766 ntBASIC6.84□□□□□ -1.31
HLA-DOAP06340 RPS3AP15-201ENST00000483874 781 ntBASIC6.84□□□□□ -1.31
HLA-DOAP06340 RN7SL570P-201ENST00000484405 292 ntBASIC6.84□□□□□ -1.31
HLA-DOAP06340 MTND3P24-201ENST00000506306 329 ntBASIC6.84□□□□□ -1.31
HLA-DOAP06340 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.84□□□□□ -1.31
HLA-DOAP06340 AC016550.3-201ENST00000515706 767 ntBASIC6.84□□□□□ -1.31
HLA-DOAP06340 AC139365.2-201ENST00000517972 253 ntBASIC6.84□□□□□ -1.31
HLA-DOAP06340 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.84□□□□□ -1.31
HLA-DOAP06340 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.84□□□□□ -1.31
HLA-DOAP06340 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HLA-DOAP06340 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.84□□□□□ -1.31
HLA-DOAP06340 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.84□□□□□ -1.31
HLA-DOAP06340 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC6.84□□□□□ -1.31
HLA-DOAP06340 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.84□□□□□ -1.31
HLA-DOAP06340 MIR4489-201ENST00000578869 62 ntBASIC6.84□□□□□ -1.31
HLA-DOAP06340 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.84□□□□□ -1.31
HLA-DOAP06340 MIR1273E-201ENST00000581165 102 ntBASIC6.84□□□□□ -1.31
HLA-DOAP06340 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.84□□□□□ -1.31
HLA-DOAP06340 AP000864.1-201ENST00000609424 650 ntBASIC6.84□□□□□ -1.31
HLA-DOAP06340 AC006946.3-201ENST00000609791 756 ntBASIC6.84□□□□□ -1.31
HLA-DOAP06340 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC6.84□□□□□ -1.31
HLA-DOAP06340 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.84□□□□□ -1.31
HLA-DOAP06340 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HLA-DOAP06340 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.84□□□□□ -1.31
HLA-DOAP06340 AP001002.1-201ENST00000625148 1513 ntBASIC6.84□□□□□ -1.31
HLA-DOAP06340 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
HLA-DOAP06340 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
HLA-DOAP06340 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
HLA-DOAP06340 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
HLA-DOAP06340 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HLA-DOAP06340 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.84□□□□□ -1.32
HLA-DOAP06340 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
HLA-DOAP06340 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.32
HLA-DOAP06340 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.84□□□□□ -1.32
HLA-DOAP06340 SRRM1P3-201ENST00000426911 2678 ntBASIC6.83□□□□□ -1.32
HLA-DOAP06340 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.83□□□□□ -1.32
HLA-DOAP06340 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HLA-DOAP06340 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
HLA-DOAP06340 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HLA-DOAP06340 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HLA-DOAP06340 AC013268.3-201ENST00000262716 2324 ntBASIC6.83□□□□□ -1.32
HLA-DOAP06340 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HLA-DOAP06340 GTF2IP4-201ENST00000453092 2054 ntBASIC6.83□□□□□ -1.32
HLA-DOAP06340 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HLA-DOAP06340 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
HLA-DOAP06340 FBXL21-201ENST00000297158 1305 ntBASIC6.83□□□□□ -1.32
HLA-DOAP06340 AC117409.1-201ENST00000470499 1310 ntBASIC6.83□□□□□ -1.32
HLA-DOAP06340 AP004607.3-201ENST00000530354 3915 ntBASIC6.83□□□□□ -1.32
HLA-DOAP06340 RN7SKP124-201ENST00000364730 341 ntBASIC6.83□□□□□ -1.32
HLA-DOAP06340 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
HLA-DOAP06340 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.83□□□□□ -1.32
HLA-DOAP06340 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.83□□□□□ -1.32
HLA-DOAP06340 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.83□□□□□ -1.32
HLA-DOAP06340 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.83□□□□□ -1.32
HLA-DOAP06340 Z85994.2-201ENST00000434327 452 ntBASIC6.83□□□□□ -1.32
HLA-DOAP06340 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
HLA-DOAP06340 AL450996.1-201ENST00000445574 1202 ntBASIC6.83□□□□□ -1.32
HLA-DOAP06340 MTCYBP14-201ENST00000457471 715 ntBASIC6.83□□□□□ -1.32
HLA-DOAP06340 AL445687.2-201ENST00000458156 728 ntBASIC6.83□□□□□ -1.32
HLA-DOAP06340 SEPT7P6-201ENST00000469999 1143 ntBASIC6.83□□□□□ -1.32
HLA-DOAP06340 AL355032.1-201ENST00000472981 438 ntBASIC6.83□□□□□ -1.32
HLA-DOAP06340 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC6.83□□□□□ -1.32
HLA-DOAP06340 RN7SL629P-201ENST00000489622 285 ntBASIC6.83□□□□□ -1.32
HLA-DOAP06340 AC093801.2-201ENST00000503966 1050 ntBASIC6.83□□□□□ -1.32
HLA-DOAP06340 C1GALT1P2-201ENST00000510813 1104 ntBASIC6.83□□□□□ -1.32
HLA-DOAP06340 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC6.83□□□□□ -1.32
HLA-DOAP06340 CD69-203ENST00000536709 1020 ntTSL 2 BASIC6.83□□□□□ -1.32
HLA-DOAP06340 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.83□□□□□ -1.32
HLA-DOAP06340 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.83□□□□□ -1.32
HLA-DOAP06340 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
HLA-DOAP06340 AC007448.1-201ENST00000582714 234 ntBASIC6.83□□□□□ -1.32
HLA-DOAP06340 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC6.83□□□□□ -1.32
HLA-DOAP06340 AC090912.3-201ENST00000609775 533 ntBASIC6.83□□□□□ -1.32
HLA-DOAP06340 AC079395.2-201ENST00000610982 737 ntBASIC6.83□□□□□ -1.32
HLA-DOAP06340 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.83□□□□□ -1.32
HLA-DOAP06340 AC090607.5-201ENST00000615692 224 ntBASIC6.83□□□□□ -1.32
HLA-DOAP06340 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.83□□□□□ -1.32
HLA-DOAP06340 MRE11P1-201ENST00000464884 2127 ntBASIC6.83□□□□□ -1.32
HLA-DOAP06340 AC114786.1-201ENST00000512892 1415 ntBASIC6.83□□□□□ -1.32
HLA-DOAP06340 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms