Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC3.3□□□□□ -1.88
APOBP04114 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC3.3□□□□□ -1.88
APOBP04114 AC067852.5-201ENST00000589299 310 ntBASIC3.3□□□□□ -1.88
APOBP04114 HIRAP1-201ENST00000605318 787 ntBASIC3.3□□□□□ -1.88
APOBP04114 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
APOBP04114 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC3.3□□□□□ -1.88
APOBP04114 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
APOBP04114 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
APOBP04114 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC3.3□□□□□ -1.88
APOBP04114 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
APOBP04114 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
APOBP04114 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
APOBP04114 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
APOBP04114 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
APOBP04114 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC3.3□□□□□ -1.88
APOBP04114 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
APOBP04114 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
APOBP04114 SNORA48.7-201ENST00000391302 135 ntBASIC3.3□□□□□ -1.88
APOBP04114 AL050305.1-201ENST00000399993 1230 ntBASIC3.3□□□□□ -1.88
APOBP04114 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC3.3□□□□□ -1.88
APOBP04114 NPM1P33-201ENST00000438918 872 ntBASIC3.3□□□□□ -1.88
APOBP04114 SCARNA22-201ENST00000503991 125 ntBASIC3.3□□□□□ -1.88
APOBP04114 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC3.3□□□□□ -1.88
APOBP04114 AC026688.1-201ENST00000520639 1168 ntBASIC3.3□□□□□ -1.88
APOBP04114 OR5AM1P-201ENST00000532136 1032 ntBASIC3.3□□□□□ -1.88
APOBP04114 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.3□□□□□ -1.88
APOBP04114 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC3.3□□□□□ -1.88
APOBP04114 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC3.3□□□□□ -1.88
APOBP04114 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
APOBP04114 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC3.3□□□□□ -1.88
APOBP04114 DHX40P1-201ENST00000588725 1412 ntBASIC3.3□□□□□ -1.88
APOBP04114 AC083899.1-201ENST00000454465 3819 ntBASIC3.3□□□□□ -1.88
APOBP04114 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
APOBP04114 MID1-203ENST00000380780 6195 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
APOBP04114 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
APOBP04114 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC3.3□□□□□ -1.88
APOBP04114 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
APOBP04114 PALLD-201ENST00000261509 5809 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
APOBP04114 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC3.3□□□□□ -1.88
APOBP04114 BX284613.1-201ENST00000452221 1641 ntBASIC3.3□□□□□ -1.88
APOBP04114 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC3.3□□□□□ -1.88
APOBP04114 RSU1P3-201ENST00000412878 835 ntBASIC3.3□□□□□ -1.88
APOBP04114 RPL21P108-201ENST00000413857 481 ntBASIC3.3□□□□□ -1.88
APOBP04114 AC023141.6-201ENST00000429418 337 ntBASIC3.3□□□□□ -1.88
APOBP04114 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.3□□□□□ -1.88
APOBP04114 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC3.3□□□□□ -1.88
APOBP04114 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC3.3□□□□□ -1.88
APOBP04114 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC3.3□□□□□ -1.88
APOBP04114 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.3□□□□□ -1.88
APOBP04114 AC006115.2-201ENST00000596823 202 ntBASIC3.3□□□□□ -1.88
APOBP04114 AC008814.1-201ENST00000603797 406 ntBASIC3.3□□□□□ -1.88
APOBP04114 MIR92B-201ENST00000607575 96 ntBASIC3.3□□□□□ -1.88
APOBP04114 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC3.3□□□□□ -1.88
APOBP04114 AC073869.8-201ENST00000641806 335 ntBASIC3.3□□□□□ -1.88
APOBP04114 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
APOBP04114 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC3.3□□□□□ -1.88
APOBP04114 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC3.3□□□□□ -1.88
APOBP04114 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
APOBP04114 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
APOBP04114 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
APOBP04114 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC3.3□□□□□ -1.88
APOBP04114 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
APOBP04114 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
APOBP04114 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
APOBP04114 AC005725.1-201ENST00000577346 2607 ntBASIC3.29□□□□□ -1.88
APOBP04114 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC3.29□□□□□ -1.88
APOBP04114 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
APOBP04114 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
APOBP04114 PCAT14-202ENST00000627127 3935 ntBASIC3.29□□□□□ -1.88
APOBP04114 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
APOBP04114 AC007996.1-201ENST00000620414 2821 ntBASIC3.29□□□□□ -1.88
APOBP04114 AL049697.2-201ENST00000403708 294 ntBASIC3.29□□□□□ -1.88
APOBP04114 RNU2-50P-201ENST00000410494 143 ntBASIC3.29□□□□□ -1.88
APOBP04114 AC119751.6-201ENST00000416712 186 ntBASIC3.29□□□□□ -1.88
APOBP04114 NANOGP9-201ENST00000439890 892 ntBASIC3.29□□□□□ -1.88
APOBP04114 AC109464.1-201ENST00000511091 819 ntBASIC3.29□□□□□ -1.88
APOBP04114 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
APOBP04114 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC3.29□□□□□ -1.88
APOBP04114 MYLK-221ENST00000583087 678 ntTSL 4 BASIC3.29□□□□□ -1.88
APOBP04114 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC3.29□□□□□ -1.88
APOBP04114 SNHG14-210ENST00000546682 8842 ntTSL 5 BASIC3.29□□□□□ -1.88
APOBP04114 AL031651.1-201ENST00000615357 1438 ntBASIC3.29□□□□□ -1.88
APOBP04114 NCKAP5-201ENST00000317721 7593 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
APOBP04114 NCKAP5-205ENST00000409261 7594 ntAPPRIS P4 TSL 5 BASIC3.29□□□□□ -1.88
APOBP04114 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC3.29□□□□□ -1.88
APOBP04114 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
APOBP04114 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
APOBP04114 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
APOBP04114 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC3.29□□□□□ -1.88
APOBP04114 HSPD1P8-201ENST00000400121 1658 ntBASIC3.29□□□□□ -1.88
APOBP04114 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
APOBP04114 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
APOBP04114 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
APOBP04114 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC3.29□□□□□ -1.88
APOBP04114 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
APOBP04114 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
APOBP04114 DNAJC19P7-201ENST00000428811 344 ntBASIC3.29□□□□□ -1.88
APOBP04114 FHP1-201ENST00000442741 703 ntBASIC3.29□□□□□ -1.88
APOBP04114 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
APOBP04114 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms