Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 GNG5P2-201ENST00000372054 207 ntBASIC6.54□□□□□ -1.36
COL4A1P02462 AL451142.1-201ENST00000375867 775 ntBASIC6.54□□□□□ -1.36
COL4A1P02462 AL807761.1-201ENST00000417622 171 ntBASIC6.54□□□□□ -1.36
COL4A1P02462 AC093162.1-201ENST00000419682 124 ntBASIC6.54□□□□□ -1.36
COL4A1P02462 RIMKLBP2-201ENST00000424737 654 ntBASIC6.54□□□□□ -1.36
COL4A1P02462 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL4A1P02462 AC091912.1-201ENST00000511351 248 ntBASIC6.54□□□□□ -1.36
COL4A1P02462 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.54□□□□□ -1.36
COL4A1P02462 AC092490.3-201ENST00000545370 572 ntBASIC6.54□□□□□ -1.36
COL4A1P02462 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
COL4A1P02462 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.54□□□□□ -1.36
COL4A1P02462 AC005341.1-201ENST00000571086 708 ntBASIC6.54□□□□□ -1.36
COL4A1P02462 AC008814.1-201ENST00000603797 406 ntBASIC6.54□□□□□ -1.36
COL4A1P02462 AP000550.3-201ENST00000637734 379 ntBASIC6.54□□□□□ -1.36
COL4A1P02462 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.54□□□□□ -1.36
COL4A1P02462 AC123769.2-201ENST00000624332 5984 ntBASIC6.54□□□□□ -1.36
COL4A1P02462 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL4A1P02462 MAPK10-263ENST00000641052 4307 ntBASIC6.54□□□□□ -1.36
COL4A1P02462 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL4A1P02462 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL4A1P02462 CASC19-243ENST00000641588 1546 ntBASIC6.54□□□□□ -1.36
COL4A1P02462 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.54□□□□□ -1.36
COL4A1P02462 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
COL4A1P02462 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
COL4A1P02462 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
COL4A1P02462 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC6.53□□□□□ -1.36
COL4A1P02462 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
COL4A1P02462 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.53□□□□□ -1.36
COL4A1P02462 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
COL4A1P02462 FABP12P1-201ENST00000401911 322 ntBASIC6.53□□□□□ -1.36
COL4A1P02462 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.53□□□□□ -1.36
COL4A1P02462 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.53□□□□□ -1.36
COL4A1P02462 AC092647.3-201ENST00000443044 633 ntBASIC6.53□□□□□ -1.36
COL4A1P02462 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.53□□□□□ -1.36
COL4A1P02462 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.53□□□□□ -1.36
COL4A1P02462 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.53□□□□□ -1.36
COL4A1P02462 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL4A1P02462 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.53□□□□□ -1.36
COL4A1P02462 H3F3BP2-201ENST00000583907 357 ntBASIC6.53□□□□□ -1.36
COL4A1P02462 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.53□□□□□ -1.36
COL4A1P02462 AL596275.2-208ENST00000641192 594 ntBASIC6.53□□□□□ -1.36
COL4A1P02462 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
COL4A1P02462 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL4A1P02462 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL4A1P02462 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC6.53□□□□□ -1.36
COL4A1P02462 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL4A1P02462 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL4A1P02462 MAPK10-270ENST00000641102 3538 ntBASIC6.53□□□□□ -1.36
COL4A1P02462 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL4A1P02462 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.53□□□□□ -1.36
COL4A1P02462 INTS6P1-201ENST00000504674 2530 ntBASIC6.53□□□□□ -1.36
COL4A1P02462 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
COL4A1P02462 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.52□□□□□ -1.36
COL4A1P02462 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.52□□□□□ -1.36
COL4A1P02462 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
COL4A1P02462 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
COL4A1P02462 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A1P02462 AC136624.1-201ENST00000400791 413 ntBASIC6.52□□□□□ -1.37
COL4A1P02462 PPIAP9-201ENST00000403866 498 ntBASIC6.52□□□□□ -1.37
COL4A1P02462 AC068138.1-201ENST00000412635 217 ntBASIC6.52□□□□□ -1.37
COL4A1P02462 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.52□□□□□ -1.37
COL4A1P02462 AL390879.1-201ENST00000439143 386 ntBASIC6.52□□□□□ -1.37
COL4A1P02462 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.52□□□□□ -1.37
COL4A1P02462 NOP56P2-201ENST00000447491 769 ntBASIC6.52□□□□□ -1.37
COL4A1P02462 CBX1P2-201ENST00000453841 458 ntBASIC6.52□□□□□ -1.37
COL4A1P02462 snoU13.20-201ENST00000459180 104 ntBASIC6.52□□□□□ -1.37
COL4A1P02462 AC092324.1-201ENST00000468671 324 ntBASIC6.52□□□□□ -1.37
COL4A1P02462 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.52□□□□□ -1.37
COL4A1P02462 OR7H2P-201ENST00000513483 306 ntBASIC6.52□□□□□ -1.37
COL4A1P02462 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.52□□□□□ -1.37
COL4A1P02462 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC6.52□□□□□ -1.37
COL4A1P02462 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A1P02462 HNRNPCP1-201ENST00000556181 766 ntBASIC6.52□□□□□ -1.37
COL4A1P02462 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.52□□□□□ -1.37
COL4A1P02462 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.52□□□□□ -1.37
COL4A1P02462 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.52□□□□□ -1.37
COL4A1P02462 AC244107.2-201ENST00000611773 76 ntBASIC6.52□□□□□ -1.37
COL4A1P02462 AC073869.8-201ENST00000641806 335 ntBASIC6.52□□□□□ -1.37
COL4A1P02462 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
COL4A1P02462 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A1P02462 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
COL4A1P02462 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
COL4A1P02462 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A1P02462 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
COL4A1P02462 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.52□□□□□ -1.37
COL4A1P02462 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A1P02462 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A1P02462 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A1P02462 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A1P02462 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A1P02462 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A1P02462 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.52□□□□□ -1.37
COL4A1P02462 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A1P02462 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC6.52□□□□□ -1.37
COL4A1P02462 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A1P02462 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A1P02462 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.52□□□□□ -1.37
COL4A1P02462 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A1P02462 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A1P02462 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms