Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AL035422.1-201ENST00000414193 397 ntBASIC4.79□□□□□ -1.64
HLA-DQB1P01920 PCNPP4-201ENST00000414817 517 ntBASIC4.79□□□□□ -1.64
HLA-DQB1P01920 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 AC023141.3-201ENST00000436698 278 ntBASIC4.79□□□□□ -1.64
HLA-DQB1P01920 AC064862.5-201ENST00000440618 334 ntBASIC4.79□□□□□ -1.64
HLA-DQB1P01920 UBQLN1P1-207ENST00000441056 1169 ntBASIC4.79□□□□□ -1.64
HLA-DQB1P01920 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 AC004890.1-201ENST00000461005 181 ntBASIC4.79□□□□□ -1.64
HLA-DQB1P01920 AL591473.1-201ENST00000464297 313 ntBASIC4.79□□□□□ -1.64
HLA-DQB1P01920 AC099521.1-201ENST00000482557 334 ntBASIC4.79□□□□□ -1.64
HLA-DQB1P01920 NPM1P29-201ENST00000483112 803 ntBASIC4.79□□□□□ -1.64
HLA-DQB1P01920 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.79□□□□□ -1.64
HLA-DQB1P01920 HMGN1P17-201ENST00000513734 295 ntBASIC4.79□□□□□ -1.64
HLA-DQB1P01920 HMGN1P9-201ENST00000515212 298 ntBASIC4.79□□□□□ -1.64
HLA-DQB1P01920 AC113191.1-201ENST00000517759 403 ntBASIC4.79□□□□□ -1.64
HLA-DQB1P01920 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 SETP1-201ENST00000556014 845 ntBASIC4.79□□□□□ -1.64
HLA-DQB1P01920 HMGN1P26-201ENST00000558737 303 ntBASIC4.79□□□□□ -1.64
HLA-DQB1P01920 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 MT1CP-201ENST00000567054 174 ntBASIC4.79□□□□□ -1.64
HLA-DQB1P01920 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 WBP1LP11-201ENST00000586141 328 ntBASIC4.79□□□□□ -1.64
HLA-DQB1P01920 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 Z95327.3-201ENST00000610385 572 ntBASIC4.79□□□□□ -1.64
HLA-DQB1P01920 AC015914.2-201ENST00000618167 288 ntBASIC4.79□□□□□ -1.64
HLA-DQB1P01920 FAM27E2-201ENST00000619668 403 ntBASIC4.79□□□□□ -1.64
HLA-DQB1P01920 AC015871.5-202ENST00000623252 701 ntBASIC4.79□□□□□ -1.64
HLA-DQB1P01920 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 MTND5P12-201ENST00000502851 1449 ntBASIC4.79□□□□□ -1.64
HLA-DQB1P01920 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQB1P01920 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 PSG10P-201ENST00000501199 1500 ntBASIC4.78□□□□□ -1.64
HLA-DQB1P01920 SMG1P7-201ENST00000565246 2704 ntBASIC4.78□□□□□ -1.64
HLA-DQB1P01920 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 MIR551B-201ENST00000384984 96 ntBASIC4.78□□□□□ -1.64
HLA-DQB1P01920 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 RN7SKP38-201ENST00000410782 309 ntBASIC4.78□□□□□ -1.64
HLA-DQB1P01920 AL357752.1-201ENST00000412817 349 ntBASIC4.78□□□□□ -1.64
HLA-DQB1P01920 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 AL389925.1-201ENST00000432257 728 ntBASIC4.78□□□□□ -1.64
HLA-DQB1P01920 LINC00328-2P-201ENST00000436585 219 ntBASIC4.78□□□□□ -1.64
HLA-DQB1P01920 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 BTF3P6-201ENST00000448054 499 ntBASIC4.78□□□□□ -1.64
HLA-DQB1P01920 RPS24P16-201ENST00000497294 392 ntBASIC4.78□□□□□ -1.64
HLA-DQB1P01920 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 SCARNA20.4-201ENST00000516969 131 ntBASIC4.78□□□□□ -1.64
HLA-DQB1P01920 OLR1-209ENST00000543993 822 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 AP005119.1-201ENST00000580956 292 ntBASIC4.78□□□□□ -1.64
HLA-DQB1P01920 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 AC073333.2-201ENST00000603589 769 ntBASIC4.78□□□□□ -1.64
HLA-DQB1P01920 WBP1LP12-201ENST00000604449 331 ntBASIC4.78□□□□□ -1.64
HLA-DQB1P01920 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC4.78□□□□□ -1.64
HLA-DQB1P01920 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 TEX41-279ENST00000629149 609 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 AC019072.1-201ENST00000604535 1551 ntBASIC4.78□□□□□ -1.64
HLA-DQB1P01920 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQB1P01920 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HLA-DQB1P01920 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQB1P01920 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQB1P01920 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DQB1P01920 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DQB1P01920 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQB1P01920 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQB1P01920 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HLA-DQB1P01920 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms